RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 FGGP02679 453 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 RBL1P28749 1068 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 CXCR5P32302 372 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 PLA2G5P39877 138 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 MPLP40238 635 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 EPHB1P54762 984 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 RPS21P63220 83 aaKnown RBP19.96■□□□□ 0.79
COL9A3-204ENST00000463487 SLC14A2Q15849 920 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 LONRF2Q1L5Z9 754 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 SETMARQ53H47 684 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-204ENST00000463487 B4GALNT4Q76KP1 1039 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 GPR161Q8N6U8 529 aaKnown RBP19.96■□□□□ 0.79
COL9A3-204ENST00000463487 CNTD1Q8N815 330 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 SPOCK2Q92563 424 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 BIRC7Q96CA5 298 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 PHOX2BQ99453 314 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 CEP41Q9BYV8 373 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 MIR1-1HGQ9H1L0 117 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 SLC25A51Q9H1U9 297 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 ARRDC1-AS1Q9H2J1 176 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 GLOD4Q9HC38 313 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 PCDHB9Q9Y5E1 797 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 RAI2Q9Y5P3 530 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 CEP192Q8TEP8 1941 aa19.96■□□□□ 0.79
COL9A3-204ENST00000463487 TRAFD1O14545 582 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-204ENST00000463487 HTRA2O43464 458 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-204ENST00000463487 GFRA3O60609 400 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 RNGTTO60942 597 aaKnown RBP19.95■□□□□ 0.78
COL9A3-204ENST00000463487 GJB3O75712 270 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 TIMP2P16035 220 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 TCP1P17987 556 aaKnown RBP19.95■□□□□ 0.78
COL9A3-204ENST00000463487 ITPKAP23677 461 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 CD27P26842 260 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 CD86P42081 329 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 ABL2P42684 1182 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 TAS2R38P59533 333 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 WASHC5Q12768 1159 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 HS1BP3Q53T59 392 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 USP45Q70EL2 814 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 ADAT2Q7Z6V5 191 aaKnown RBP19.95■□□□□ 0.78
COL9A3-204ENST00000463487 HORMAD1Q86X24 394 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 CXorf40AQ8TE69 158 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 DNASE2BQ8WZ79 361 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 LRRC45Q96CN5 670 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 IMP4Q96G21 291 aaKnown RBP19.95■□□□□ 0.78
COL9A3-204ENST00000463487 FAM118BQ9BPY3 351 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 C1QTNF7Q9BXJ2 289 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 ADGRE3Q9BY15 652 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 VPS45Q9NRW7 570 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 PILRBQ9UKJ0 227 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 DNPEPQ9ULA0 475 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 PHTF1Q9UMS5 762 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 DMTF1Q9Y222 760 aa19.95■□□□□ 0.78
COL9A3-204ENST00000463487 ANKRD36A6QL64 1941 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 A0A1W2PQU0 124 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 TTC24A2A3L6 582 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-204ENST00000463487 CTAGE9A4FU28 777 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 CES2O00748 559 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 PGLSO95336 258 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 ATP1A1P05023 1023 aaKnown RBP19.94■□□□□ 0.78
COL9A3-204ENST00000463487 ACTN2P35609 894 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 RPL26P61254 145 aaKnown RBP19.94■□□□□ 0.78
COL9A3-204ENST00000463487 TRAF2Q12933 501 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 PRPSAP1Q14558 356 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 CCDC70Q6NSX1 233 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 ASCL5Q7RTU5 278 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 ARRDC2Q8TBH0 407 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 VOPP1Q96AW1 172 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 SKA1Q96BD8 255 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 OSBPL9Q96SU4 736 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 NAPGQ99747 312 aaPredicted RBP19.94■□□□□ 0.78
COL9A3-204ENST00000463487 PCDH12Q9NPG4 1184 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 RSPH14Q9UHP6 348 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 EIF2B4Q9UI10 523 aaKnown RBP19.94■□□□□ 0.78
COL9A3-204ENST00000463487 SNX12Q9UMY4 172 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 RPL26L1Q9UNX3 145 aaKnown RBP19.94■□□□□ 0.78
COL9A3-204ENST00000463487 NUMA1Q14980 2115 aa19.94■□□□□ 0.78
COL9A3-204ENST00000463487 A0A1W2PPC4 97 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 TCRBV7S2A1N4TA0A589 114 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 GOLGA6CA6NDK9 693 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 GOLGA6BA6NDN3 693 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 AREL1O15033 823 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 LATO43561 262 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 LIASO43766 372 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 OPHN1O60890 802 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 IGHV4-34P06331 123 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 GOLGA6DP0CG33 693 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 STIP1P31948 543 aaKnown RBP19.93■□□□□ 0.78
COL9A3-204ENST00000463487 FAM193AP78312 1265 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 SGCGQ13326 291 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 TEAD4Q15561 434 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 DUOXA1Q1HG43 343 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 PEAR1Q5VY43 1037 aaPredicted RBP19.93■□□□□ 0.78
COL9A3-204ENST00000463487 ZNF567Q8N184 647 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 SLC35B2Q8TB61 432 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 IFT43Q96FT9 208 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 RBM15Q96T37 977 aaKnown RBP eCLIP19.93■□□□□ 0.78
COL9A3-204ENST00000463487 TDRD1Q9BXT4 1180 aaKnown RBP19.93■□□□□ 0.78
COL9A3-204ENST00000463487 PCDH9Q9HC56 1237 aa19.93■□□□□ 0.78
COL9A3-204ENST00000463487 GOLGA6AQ9NYA3 693 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms