RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TAS2R39P59534 338 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 PTPRRQ15256 657 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 ASRGL1Q7L266 308 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 TMC8Q8IU68 726 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 MAB21L3Q8N8X9 362 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 OR13C4Q8NGS5 318 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 RAB3IL1Q8TBN0 382 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SKA1Q96BD8 255 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 DNAJC1Q96KC8 554 aaKnown RBP12.91□□□□□ -0.34
VAPB-203ENST00000463370 SORT1Q99523 831 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 OLFM1Q99784 485 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 CINPQ9BW66 212 aaPredicted RBP12.91□□□□□ -0.34
VAPB-203ENST00000463370 NMRAL1Q9HBL8 299 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 IL23AQ9NPF7 189 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 THAP1Q9NVV9 213 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SEPT3Q9UH03 358 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 ZFP69BQ9UJL9 534 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 PCDHB12Q9Y5F1 795 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 EFCAB14O75071 495 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 BAIAP3O94812 1187 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 OLFM2O95897 454 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 PDHA1P08559 390 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SERPINF2P08697 491 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 BMP1P13497 986 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 CR2P20023 1033 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 PPP3CCP48454 512 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 CCDC153Q494R4 210 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 Q6ZNB5 142 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SPRED2Q7Z698 418 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SETD3Q86TU7 594 aaPredicted RBP12.91□□□□□ -0.34
VAPB-203ENST00000463370 CRLF3Q8IUI8 442 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 OR6Y1Q8NGX8 325 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 OR6P1Q8NGX9 317 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 ELMO2Q96JJ3 720 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 FEM1CQ96JP0 617 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 TBATAQ96M53 351 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 OMDQ99983 421 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 EBF4Q9BQW3 602 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 LRRC3Q9BY71 257 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SMG9Q9H0W8 520 aaKnown RBP12.91□□□□□ -0.34
VAPB-203ENST00000463370 TASP1Q9H6P5 420 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 SPO11Q9Y5K1 396 aa12.91□□□□□ -0.34
VAPB-203ENST00000463370 GFRA2O00451 464 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 PAPSS2O95340 614 aaPredicted RBP12.9□□□□□ -0.34
VAPB-203ENST00000463370 PRLP01236 227 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 SERPINE1P05121 402 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 PRSS56P0CW18 603 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 RALBP11234 206 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 ERVFC1P60507 584 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 UGP2Q16851 508 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 FIBCD1Q8N539 461 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 KLHL29Q96CT2 875 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 FAM167BQ9BTA0 163 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.9□□□□□ -0.34
VAPB-203ENST00000463370 PNPOQ9NVS9 261 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.9□□□□□ -0.34
VAPB-203ENST00000463370 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 CLEC4EQ9ULY5 219 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 DNAJC16Q9Y2G8 782 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 PCDHGC4Q9Y5F7 938 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 PTPRSQ13332 1948 aa12.9□□□□□ -0.34
VAPB-203ENST00000463370 A0A0U1RQS6 177 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 A0A1W2PRU2 124 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 ZMPSTE24O75844 475 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 CXCL14O95715 111 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 KRT16P08779 473 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 CCR10P46092 362 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 RAB10P61026 200 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
VAPB-203ENST00000463370 TMC7Q7Z402 723 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 MAVSQ7Z434 540 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 SLC22A17Q8WUG5 538 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 BADQ92934 168 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 NXNL1Q96CM4 212 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 GPR78Q96P69 363 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 NMUR2Q9GZQ4 415 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 PLK2Q9NYY3 685 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 ARMCX1Q9P291 453 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 RUVBL2Q9Y230 463 aaKnown RBP12.89□□□□□ -0.35
VAPB-203ENST00000463370 H0Y626 953 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 INSIG1O15503 277 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 TMCC1O94876 653 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 MT-CO1P00395 513 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 FGF1P05230 155 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 C8AP07357 584 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 HSPA8P11142 646 aaKnown RBP12.89□□□□□ -0.35
VAPB-203ENST00000463370 NQO1P15559 274 aaKnown RBP12.89□□□□□ -0.35
VAPB-203ENST00000463370 HLA-DPA1P20036 260 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 HADHAP40939 763 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 LEPRP48357 1165 aaKnown RBP12.89□□□□□ -0.35
VAPB-203ENST00000463370 SLC12A1Q13621 1099 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 SEMA3AQ14563 771 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 DBN1Q16643 649 aa12.89□□□□□ -0.35
VAPB-203ENST00000463370 CYB5D1Q6P9G0 228 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms