RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TTC7BQ86TV6 843 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 PLD5Q8N7P1 536 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SLC17A9Q9BYT1 436 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 GAREM1Q9H706 876 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 DTLQ9NZJ0 730 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SLCO1B1Q9Y6L6 691 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 TRPM6Q9BX84 2022 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SPTBN4Q9H254 2564 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 TLR4O00206 839 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 PPP1R12AO14974 1030 aaPredicted RBP13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SPINT1O43278 529 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 HTRA2O43464 458 aaPredicted RBP13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 TGM2P21980 687 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 CTNNA2P26232 953 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 CTNNA1P35221 906 aaKnown RBP13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 CDKN2BP42772 138 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 RGRP47804 291 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 CCT8P50990 548 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 NXPH1P58417 271 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 KIF5AQ12840 1032 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SGCGQ13326 291 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SUZ12Q15022 739 aaKnown RBP13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 UGP2Q16851 508 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 INAVAQ3KP66 663 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 RFX6Q8HWS3 928 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 CCDC13Q8IYE1 715 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SYCE1Q8N0S2 351 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 POLR1EQ9GZS1 481 aaKnown RBP13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 FSCN3Q9NQT6 498 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 EFR3BQ9Y2G0 817 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 ATP8A1Q9Y2Q0 1164 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
R3HDM1-213ENST00000463230 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 TRAFD1O14545 582 aaPredicted RBP13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 MUSKO15146 869 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 PCDHGA12O60330 932 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 PIGNO95427 931 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 CEACAM1P13688 526 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 CA4P22748 312 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 MAT2AP31153 395 aaKnown RBP13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 SCNN1BP51168 640 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 IFI35P80217 286 aaPredicted RBP13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 GBE1Q04446 702 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 AGERQ15109 404 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 TFDP3Q5H9I0 405 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 KYAT3Q6YP21 454 aaKnown RBP13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 ABI3BPQ7Z7G0 1075 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 NETO2Q8NC67 525 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 ACRBPQ8NEB7 543 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 IFT43Q96FT9 208 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 OLFM3Q96PB7 478 aa13.18□□□□□ -0.3
R3HDM1-213ENST00000463230 A6NNZ2 444 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 ZNF189O75820 626 aaPredicted RBP13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 WNT1P04628 370 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 PTPN7P35236 360 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 RXRGP48443 463 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 SEL1L3Q68CR1 1132 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 MFSD7Q6UXD7 560 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 DBX2Q6ZNG2 339 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 CAMK1DQ8IU85 385 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 PGBD5Q8N414 524 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 RNF10Q8N5U6 811 aaKnown RBP13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 KIAA1524Q8TCG1 905 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 KLHDC7BQ96G42 594 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 KCTD5Q9NXV2 234 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 PCDHA3Q9Y5H8 950 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 A0A1B0GTQ1 180 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 SLC31A1O15431 190 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 FLRT2O43155 660 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 MTSS1O43312 755 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 NRDCO43847 1150 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 NEBLO76041 1014 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 TM7SF2O76062 418 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 KRT10P13645 584 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 CD59P13987 128 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 CCNB1P14635 433 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 MMP12P39900 470 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 CETN2P41208 172 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 NAP1L1P55209 391 aaKnown RBP13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 SLC10A2Q12908 348 aaPredicted RBP13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 SLC14A2Q15849 920 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 DPPA4Q7L190 304 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 NDUFAF2Q8N183 169 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 LRRC57Q8N9N7 239 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 ELF4Q99607 663 aaPredicted RBP13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 PCDH12Q9NPG4 1184 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 GPR27Q9NS67 375 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 TM7SF3Q9NS93 570 aa13.17□□□□□ -0.3
R3HDM1-213ENST00000463230 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms