RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 PCDH20Q8N6Y1 951 aaKnown RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 OR6C4Q8NGE1 309 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 RAB7BQ96AH8 199 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 HEPHQ9BQS7 1158 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 EDEM3Q9BZQ6 932 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 SLC13A1Q9BZW2 595 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 CDH19Q9H159 772 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 MUC3BQ9H195 1237 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 THAP9Q9H5L6 903 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 ATP13A2Q9NQ11 1180 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 MBNL1Q9NR56 388 aaKnown RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 ASNSD1Q9NWL6 643 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 ARHGEF38Q9NXL2 777 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 SIRPGQ9P1W8 387 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 IPO11Q9UI26 975 aaKnown RBP7.82□□□□□ -1.16
SMC3-202ENST00000462899 PCDHGA3Q9Y5H0 932 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 RNF215Q9Y6U7 377 aa7.82□□□□□ -1.16
SMC3-202ENST00000462899 F8P00451 2351 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 CXorf51AA0A1B0GTR3 108 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 DRGXA6NNA5 263 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 ESPNB1AK53 854 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 PAGE1O75459 146 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 RHOCP08134 193 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 GLI1P08151 1106 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 ALPIP09923 528 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 EPB41P11171 864 aaKnown RBP7.81□□□□□ -1.16
SMC3-202ENST00000462899 CCL4P13236 92 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 PFKFB1P16118 471 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 GLB1P16278 677 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 NOS2P35228 1153 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 EIF4A3P38919 411 aaKnown RBP7.81□□□□□ -1.16
SMC3-202ENST00000462899 PEX5P50542 639 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 THOP1P52888 689 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 B4GALNT1Q00973 533 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 GCNT1Q02742 428 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 PPARDQ03181 441 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 LRMPQ12912 555 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 MTA1Q13330 715 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 PDCLQ13371 301 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 HLTFQ14527 1009 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMC3-202ENST00000462899 NR1D2Q14995 579 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 ELOCQ15369 112 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 DENND1BQ6P3S1 775 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 DEFB106AQ8N104 65 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 OR7D4Q8NG98 312 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 C9orf43Q8TAL5 461 aaPredicted RBP7.81□□□□□ -1.16
SMC3-202ENST00000462899 GPBAR1Q8TDU6 330 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 KREMEN1Q96MU8 473 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 CATSPER2Q96P56 530 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 RBM15Q96T37 977 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMC3-202ENST00000462899 CMKLR1Q99788 373 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 SPRY4Q9C004 299 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 SEMA6CQ9H3T2 930 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 FAM204AQ9H8W3 233 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 ST7Q9NRC1 585 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 DDIT4Q9NX09 232 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 GULP1Q9UBP9 304 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 USP25Q9UHP3 1055 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 SLC12A6Q9UHW9 1150 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 PCDHB4Q9Y5E5 795 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 PCDHB11Q9Y5F2 797 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 ACTL7AQ9Y615 435 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 TACC2O95359 2948 aa7.81□□□□□ -1.16
SMC3-202ENST00000462899 DCHS2Q6V1P9 2916 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 C16orf96A6NNT2 1141 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 HGSO14964 777 aaPredicted RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 CETN3O15182 167 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 MTSS1O43312 755 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 ADCY5O95622 1261 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 FGF3P11487 239 aaPredicted RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 GKP32189 559 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 UGT1A3P35503 534 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 UQCRFS1P47985 274 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 ME1P48163 572 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 FMO5P49326 533 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 BLKP51451 505 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 MAPK10P53779 464 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 PMS1P54277 932 aaKnown RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 SGCGQ13326 291 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 IRF4Q15306 451 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 COBLL1Q53SF7 1204 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 ZNF805Q5CZA5 627 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 CARD16Q5EG05 197 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 DCAF17Q5H9S7 520 aaPredicted RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 FAXCQ5TGI0 409 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 OLFML1Q6UWY5 402 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 ZNF783Q6ZMS7 281 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 ZNF438Q7Z4V0 828 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 VPS36Q86VN1 386 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 C17orf82Q86X59 251 aaPredicted RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 TICAM1Q8IUC6 712 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 ARHGEF19Q8IW93 802 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 SMYD4Q8IYR2 804 aaPredicted RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 SPATA20Q8TB22 786 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 JPH3Q8WXH2 748 aaPredicted RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 NT5C3BQ969T7 300 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 FUBP1Q96AE4 644 aaKnown RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 ISG20Q96AZ6 181 aaKnown RBP7.8□□□□□ -1.16
SMC3-202ENST00000462899 PDXPQ96GD0 296 aa7.8□□□□□ -1.16
SMC3-202ENST00000462899 SLC45A3Q96JT2 553 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms