RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 OPA1O60313 960 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 ZNF189O75820 626 aaPredicted RBP11.21□□□□□ -0.62
APTX-209ENST00000460940 TJP3O95049 919 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 MAP3K6O95382 1288 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 PYGMP11217 842 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 HOXD12P35452 270 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 NEK3P51956 506 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 ADPRHP54922 357 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 IFI35P80217 286 aaPredicted RBP11.21□□□□□ -0.62
APTX-209ENST00000460940 CNTN1Q12860 1018 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 ZNF805Q5CZA5 627 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 MEI1Q5TIA1 1274 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 AGBL4Q5VU57 503 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 LYSMD4Q5XG99 296 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 GDPD4Q6W3E5 623 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 ERN2Q76MJ5 926 aaKnown RBP11.21□□□□□ -0.62
APTX-209ENST00000460940 FAM124AQ86V42 546 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 FRMD1Q8N878 549 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 OR2T34Q8NGX1 318 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 OR6K2Q8NGY2 324 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 HCAR2Q8TDS4 363 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 P3H4Q92791 437 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 ZNF419Q96HQ0 510 aaPredicted RBP11.21□□□□□ -0.62
APTX-209ENST00000460940 EXOC2Q96KP1 924 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 ZNF641Q96N77 438 aaPredicted RBP11.21□□□□□ -0.62
APTX-209ENST00000460940 FAM210AQ96ND0 272 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 PHOX2BQ99453 314 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 NEUROG2Q9H2A3 272 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 ATP13A3Q9H7F0 1226 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 DKK3Q9UBP4 350 aa11.21□□□□□ -0.62
APTX-209ENST00000460940 EVLQ9UI08 416 aaPredicted RBP11.21□□□□□ -0.62
APTX-209ENST00000460940 PACSIN2Q9UNF0 486 aaPredicted RBP11.21□□□□□ -0.62
APTX-209ENST00000460940 GVINP1Q7Z2Y8 2422 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 EP300Q09472 2414 aaPredicted RBP11.2□□□□□ -0.62
APTX-209ENST00000460940 MYO15AQ9UKN7 3530 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.2□□□□□ -0.62
APTX-209ENST00000460940 MTSS1O43312 755 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 PLRG1O43660 514 aaKnown RBP11.2□□□□□ -0.62
APTX-209ENST00000460940 LRP3O75074 770 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 UGT2B4P06133 528 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 CCNB1P14635 433 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 EZRP15311 586 aaKnown RBP11.2□□□□□ -0.62
APTX-209ENST00000460940 CES1P23141 567 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 SERPINA4P29622 427 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 SUOXP51687 545 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 CKAP4Q07065 602 aaKnown RBP11.2□□□□□ -0.62
APTX-209ENST00000460940 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
APTX-209ENST00000460940 RPS6KA1Q15418 735 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 LPAL2Q16609 132 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 WDR45BQ5MNZ6 344 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 SYCP2LQ5T4T6 812 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 PIP5KL1Q5T9C9 394 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 CCDC181Q5TID7 509 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 ALG1LQ6GMV1 187 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 NPNTQ6UXI9 565 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 CYP2U1Q7Z449 544 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 TAX1BP1Q86VP1 789 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 TMEFF1Q8IYR6 380 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 RAB7BQ96AH8 199 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 ARRDC3Q96B67 414 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 NUDCD1Q96RS6 583 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 LGMNQ99538 433 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 GPR174Q9BXC1 333 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 POLR1EQ9GZS1 481 aaKnown RBP11.2□□□□□ -0.62
APTX-209ENST00000460940 CARD9Q9H257 536 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 PREBQ9HCU5 417 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 BATF3Q9NR55 127 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
APTX-209ENST00000460940 TSPAN11A1L157 253 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 HACD1B0YJ81 288 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 NDUFAB1O14561 156 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 MUSKO15146 869 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 SOCS5O75159 536 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 PECAM1P16284 738 aaPredicted RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 CR2P20023 1033 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 ACSL1P33121 698 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 RGRP47804 291 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 DHPSP49366 369 aaPredicted RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 METAP1P53582 386 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 CLNS1AP54105 237 aaKnown RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 AP1B1Q10567 949 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 XRCC4Q13426 336 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 SNCBQ16143 134 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 POM121L1PQ3SYA9 428 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 SEL1L2Q5TEA6 688 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 BRAT1Q6PJG6 821 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 PARS2Q7L3T8 475 aaKnown RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 RABEPKQ7Z6M1 372 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 OR14C36Q8NHC7 312 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 TFB1MQ8WVM0 346 aaKnown RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 VOPP1Q96AW1 172 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 HSPA12BQ96MM6 686 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 QKIQ96PU8 341 aaKnown RBP eCLIP11.19□□□□□ -0.62
APTX-209ENST00000460940 HEMGNQ9BXL5 484 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 A0A1W2PQ67 120 aa11.19□□□□□ -0.62
APTX-209ENST00000460940 BCLAF3A2AJT9 711 aaKnown RBP11.19□□□□□ -0.62
APTX-209ENST00000460940 C16orf96A6NNT2 1141 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms