RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 PFKFB3Q16875 520 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SMTNL2Q2TAL5 461 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 NT5DC1Q5TFE4 455 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 BICRALQ6AI39 1079 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MOXD1Q6UVY6 613 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MAEAQ7L5Y9 396 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TAOK1Q7L7X3 1001 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 GDF7Q7Z4P5 450 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MILR1Q7Z6M3 343 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 DSG4Q86SJ6 1040 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TMEM25Q86YD3 366 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 FBXO39Q8N4B4 442 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CCDC148Q8NFR7 591 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 OR2T3Q8NH03 318 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SPATA3Q8NHX4 192 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SLC35G2Q8TBE7 412 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 IFI44Q8TCB0 444 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CPT1CQ8TCG5 803 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TBCKQ8TEA7 893 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 ARRDC3Q96B67 414 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CLIP3Q96DZ5 547 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 DYDC2Q96IM9 177 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 RAX2Q96IS3 184 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 LURAP1Q96LR2 239 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 C5orf34Q96MH7 638 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 GBP4Q96PP9 640 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TAAR9Q96RI9 348 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TCHPQ9BT92 498 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SARGQ9BW04 601 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 BBS2Q9BXC9 721 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 PRDM7Q9NQW5 492 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MBNL3Q9NUK0 354 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 EHD2Q9NZN4 543 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 WDR35Q9P2L0 1181 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 DDX25Q9UHL0 483 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 NUDT5Q9UKK9 219 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 UBQLN1Q9UMX0 589 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CTNND2Q9UQB3 1225 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SH3BP1Q9Y3L3 701 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 FBN1P35555 2871 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 DCHS2Q6V1P9 2916 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 PTPRJQ12913 1337 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 A0A1W2PR77 199 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 UBA6A0AVT1 1052 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 PRSS38A1L453 326 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 PRAMEF25A6NGN4 478 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 FAM47DPA6NHR8 397 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 K7ERI5 159 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 NVLO15381 856 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 FFAR2O15552 330 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 LYPLA2O95372 231 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 OLFM2O95897 454 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 DNTTP04053 509 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 HARSP12081 509 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 RARGP13631 454 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 MTHFD2P13995 350 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 TYRP14679 529 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 CYP2F1P24903 491 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 UGT1A5P35504 534 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 ARL4AP40617 200 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 ALDH6A1Q02252 535 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 ZBTB16Q05516 673 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 OVGP1Q12889 678 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 HDAC1Q13547 482 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 DHX8Q14562 1220 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 NR1I3Q14994 352 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 MUM1Q2TAK8 710 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 EIF2S3LQ2VIR3 472 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 TTC38Q5R3I4 469 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 NCAPH2Q6IBW4 605 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 SERPINA13PQ6UXR4 307 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 RAB11FIP2Q7L804 512 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 CHST15Q7LFX5 561 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 CCDC83Q8IWF9 413 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 SCN4BQ8IWT1 228 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 BBS7Q8IWZ6 715 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 SMC5Q8IY18 1101 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 SLC25A45Q8N413 288 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 WDR48Q8TAF3 677 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 SERAC1Q96JX3 654 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 IFT74Q96LB3 600 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 APOLD1Q96LR9 279 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 SLC29A3Q9BZD2 475 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 RNF38Q9H0F5 515 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 POFUT1Q9H488 388 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 PLEKHA5Q9HAU0 1116 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 DNAJC28Q9NX36 388 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 NLGN3Q9NZ94 848 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 DTLQ9NZJ0 730 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 NCKIPSDQ9NZQ3 722 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 THAP10Q9P2Z0 257 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 SEL1LQ9UBV2 794 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 ERRFI1Q9UJM3 462 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 NCKAP1Q9Y2A7 1128 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 TP53TG5Q9Y2B4 290 aa4.2□□□□□ -1.74
ECHDC1-211ENST00000460558 NOTCH1P46531 2555 aa4.19□□□□□ -1.74
ECHDC1-211ENST00000460558 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-211ENST00000460558 A0A1W2PQJ5 194 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms