RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 ZNF354CQ86Y25 554 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 SUGP1Q8IWZ8 645 aaKnown RBP14.23□□□□□ -0.13
ERCC3-205ENST00000460485 PARP9Q8IXQ6 854 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 LGI2Q8N0V4 545 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 ARHGAP24Q8N264 748 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 PSMG2Q969U7 264 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 CCDC126Q96EE4 140 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 IFT43Q96FT9 208 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 B3GALT6Q96L58 329 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 APOL2Q9BQE5 337 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 MGME1Q9BQP7 344 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 MFSD1Q9H3U5 465 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 PIH1D1Q9NWS0 290 aaKnown RBP14.23□□□□□ -0.13
ERCC3-205ENST00000460485 DNAJC28Q9NX36 388 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 UBP1Q9NZI7 540 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 APOBEC2Q9Y235 224 aaKnown RBP14.23□□□□□ -0.13
ERCC3-205ENST00000460485 ZNF510Q9Y2H8 683 aa14.23□□□□□ -0.13
ERCC3-205ENST00000460485 LCHNA4D1U4 455 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 NT5C1B-RDH14C9J2C7 533 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 SLCO1B7G3V0H7 640 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 C2P06681 752 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 MYL2P10916 166 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 HMGA1P17096 107 aaKnown RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 CD86P42081 329 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 LEPRP48357 1165 aaKnown RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 SLC1A6P48664 564 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 MNAT1P51948 309 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 OXCT1P55809 520 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 WDR5P61964 334 aaKnown RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ELF3P78545 371 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ITKQ08881 620 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 SLC10A7Q0GE19 358 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 USP10Q14694 798 aaKnown RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 SPOUT1Q5T280 376 aaKnown RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ADGRF1Q5T601 910 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 NADSYN1Q6IA69 706 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 NEPROQ6NW34 567 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 CES3Q6UWW8 571 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 METTL3Q86U44 580 aaKnown RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ARID3BQ8IVW6 561 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 OR6Y1Q8NGX8 325 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ARRDC2Q8TBH0 407 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 GIPC2Q8TF65 315 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 PDCD6IPQ8WUM4 868 aaKnown RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 USP13Q92995 863 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ZNF419Q96HQ0 510 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 PSKH2Q96QS6 385 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 AGAP2Q99490 1192 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 C19orf43Q9BQ61 176 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 CLSTN3Q9BQT9 956 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ZBED2Q9BTP6 218 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 TLE6Q9H808 572 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 KCNK13Q9HB14 408 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 NMRAL1Q9HBL8 299 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 POPDC3Q9HBV1 291 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 HEY2Q9UBP5 337 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 UBA2Q9UBT2 640 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-205ENST00000460485 DCTN4Q9UJW0 460 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 VPS9D1Q9Y2B5 631 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 TBC1D30Q9Y2I9 924 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 ACOT9Q9Y305 439 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
ERCC3-205ENST00000460485 PTPRSQ13332 1948 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.21□□□□□ -0.13
ERCC3-205ENST00000460485 FAM95CA0A1B0GW59 222 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 CCDC189A1A4V9 331 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 MROH6A6NGR9 719 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 J3KR12 359 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 PFDN6O15212 129 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 KDELR3O43731 214 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 TRIM13O60858 407 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 SOAT2O75908 522 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 VAPBO95292 243 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 GJB5O95377 273 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 NDST3O95803 873 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 TBX18O95935 607 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 GSRP00390 522 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 RHOCP08134 193 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 SERPINA6P08185 405 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 MMP2P08253 660 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 TPH1P17752 444 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 OGNP20774 298 aaKnown RBP14.21□□□□□ -0.13
ERCC3-205ENST00000460485 PTPN5P54829 565 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 ABCE1P61221 599 aaKnown RBP14.21□□□□□ -0.13
ERCC3-205ENST00000460485 ZP2Q05996 745 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 ZNF177Q13360 481 aaPredicted RBP14.21□□□□□ -0.13
ERCC3-205ENST00000460485 OLIG2Q13516 323 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 SEPT6Q14141 434 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 KLC3Q6P597 504 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 ZYG11AQ6WRX3 759 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 RAPH1Q70E73 1250 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 RTL10Q7L3V2 364 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 TAS1R1Q7RTX1 841 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 BMP8AQ7Z5Y6 402 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 MTDHQ86UE4 582 aaKnown RBP14.21□□□□□ -0.13
ERCC3-205ENST00000460485 HJURPQ8NCD3 748 aaPredicted RBP14.21□□□□□ -0.13
ERCC3-205ENST00000460485 GPR150Q8NGU9 434 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 RFWD2Q8NHY2 731 aa14.21□□□□□ -0.13
ERCC3-205ENST00000460485 TTC8Q8TAM2 541 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms