RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 MAGEE1Q9HCI5 957 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 GJB4Q9NTQ9 266 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 ZNF879B4DU55 563 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 MDM4O15151 490 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 TGDSO95455 350 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 MFSD10Q14728 455 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 SWI5Q1ZZU3 235 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 HKDC1Q2TB90 917 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 DDI2Q5TDH0 399 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 ADAMTSL2Q86TH1 951 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 AKAP14Q86UN6 197 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 GPALPP1Q8IXQ4 340 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 DAW1Q8N136 415 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 TMEM199Q8N511 208 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 KBTBD7Q8WVZ9 684 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 LEF1Q9UJU2 399 aaPredicted RBP8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 SDK1Q7Z5N4 2213 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 SLC22A2O15244 555 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 CASP5P51878 434 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 GPAT3Q53EU6 434 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 TMPRSS11AQ6ZMR5 421 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 AMIGO1Q86WK6 493 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 AGO4Q9HCK5 861 aaKnown RBP8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 FAM86C2PA6NEL3 165 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 XKRYO14609 159 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 ALDH3A2P51648 485 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 NDUFA9Q16795 377 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 EPHA10Q5JZY3 1008 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 STK32CQ86UX6 486 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 FBXO16Q8IX29 292 aaPredicted RBP8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 PTCD2Q8WV60 388 aaKnown RBP8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 TMEM121Q9BTD3 319 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 SPAG4Q9NPE6 437 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 EXD2Q9NVH0 621 aa8.95□□□□□ -0.98
SHROOM4-203ENST00000460112 A0A0G2JLW4 131 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 KPNA3O00505 521 aaPredicted RBP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 NAA30Q147X3 362 aaPredicted RBP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PYDC2Q56P42 97 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 TTI2Q6NXR4 508 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ZCCHC9Q8N567 271 aaKnown RBP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 RXFP2Q8WXD0 754 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 KAT2BQ92831 832 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 RFT1Q96AA3 541 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 UPB1Q9UBR1 384 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ZMYM5Q9UJ78 669 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 VWDEQ8N2E2 1590 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 KNDC1Q76NI1 1749 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PPP1R3GB7ZBB8 358 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 OTCP00480 354 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 HMGCRP04035 888 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ZNF286BP0CG31 522 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ACADVLP49748 655 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PTPRNQ16849 979 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PCID2Q5JVF3 399 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 GRPEL2Q8TAA5 225 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 TMEM165Q9HC07 324 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 MTRRQ9UBK8 725 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 DMGDHQ9UI17 866 aaKnown RBP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 RGSL1A5PLK6 1076 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 MAP2K7O14733 419 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 CYB5AP00167 134 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 IDO1P14902 403 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 CCNCP24863 283 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 CLCN5P51795 746 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 SLC6A3Q01959 620 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 SMARCB1Q12824 385 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ATP13A5Q4VNC0 1218 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 RAET1GQ6H3X3 334 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 RHOBTB2Q9BYZ6 727 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 RSPH9Q9H1X1 276 aaPredicted RBP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 DNAJB4Q9UDY4 337 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 NUDT5Q9UKK9 219 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 TSPAN16Q9UKR8 245 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PLK4O00444 970 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 CDC40O60508 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 UGT2B17O75795 530 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 SGPL1O95470 568 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 MSL3P1P0C860 447 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 KLRC1P26715 233 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 NEDD8Q15843 81 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 FAM131BQ86XD5 332 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 RASSF5Q8WWW0 418 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 TP53INP1Q96A56 240 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 MORF4L1Q9UBU8 362 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ATPIF1Q9UII2 106 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 N6AMT1Q9Y5N5 214 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 MROH1Q8NDA8 1641 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PRKAR2AP13861 404 aaKnown RBP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 EPHX2P34913 555 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ATP5C1P36542 298 aaKnown RBP8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 TAS2R41P59536 307 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 C5orf22Q49AR2 442 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ZCCHC12Q6PEW1 402 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 PHYKPLQ8IUZ5 450 aa8.94□□□□□ -0.98
SHROOM4-203ENST00000460112 ZNF34Q8IZ26 560 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms