RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 BRD8Q9H0E9 1235 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 KCNK12Q9HB15 430 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 SPATS2LQ9NUQ6 558 aaKnown RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 THG1LQ9NWX6 298 aaKnown RBP10.46□□□□□ -0.74
USP39-210ENST00000459775 EPS15L1Q9UBC2 864 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 ANAPC5Q9UJX4 755 aa10.46□□□□□ -0.74
USP39-210ENST00000459775 ARNTLO00327 626 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 DNALI1O14645 258 aaPredicted RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 BNIP3LO60238 219 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 CISD3P0C7P0 127 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 PABPC1P11940 636 aaKnown RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 GLULP15104 373 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 GKP32189 559 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 GJA4P35212 333 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 MMP13P45452 471 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 IFI35P80217 286 aaPredicted RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 LBRQ14739 615 aaKnown RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 ATXN7L2Q5T6C5 722 aaPredicted RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 RNASEH2BQ5TBB1 312 aaKnown RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 MARC1Q5VT66 337 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 CCDC25Q86WR0 208 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 ATP11CQ8NB49 1132 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 ART4Q93070 314 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 ATP2A3Q93084 1043 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 E2F7Q96AV8 911 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 SKA1Q96BD8 255 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 OTUB2Q96DC9 234 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 RUNDC3BQ96NL0 473 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 RBM15Q96T37 977 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP39-210ENST00000459775 TRIM56Q9BRZ2 755 aaKnown RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 CENPOQ9BU64 300 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 TM6SF2Q9BZW4 377 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 TNKS2Q9H2K2 1166 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 BRD9Q9H8M2 597 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 MARK1Q9P0L2 795 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 RAB21Q9UL25 225 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 SNX5Q9Y5X3 404 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 ZNF318Q5VUA4 2279 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 NUP210Q8TEM1 1887 aaPredicted RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 CACNG3O60359 315 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 ECI2O75521 394 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 NFATC1O95644 943 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 ADH1CP00326 375 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 ACTN2P35609 894 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 OPRD1P41143 372 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 DGKGP49619 791 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 CBLBQ13191 982 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 TERF2Q15554 542 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 MSS51Q4VC12 460 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 FNBP1LQ5T0N5 605 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 EMC10Q5UCC4 262 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 SYDE1Q6ZW31 735 aaPredicted RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 ETFBKMTQ8IXQ9 262 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 PRCCQ92733 491 aaPredicted RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 SMIM14Q96QK8 99 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 CIPCQ9C0C6 399 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 OBP2AQ9NY56 170 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 PAK5Q9P286 719 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 UBA2Q9UBT2 640 aaPredicted RBP10.45□□□□□ -0.74
USP39-210ENST00000459775 HPCAL4Q9UM19 191 aa10.45□□□□□ -0.74
USP39-210ENST00000459775 DENND4AQ7Z401 1863 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 M0QX08 132 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 INSIG1O15503 277 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 HOXC11O43248 304 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 OPHN1O60890 802 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 PMPCBO75439 489 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 TMCC1O94876 653 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 RAC2P15153 192 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 HNRNPDQ14103 355 aaKnown RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 FASTKD3Q14CZ7 662 aaKnown RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 PDGFRLQ15198 375 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 PTPRRQ15256 657 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 PCSK7Q16549 785 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 DGKKQ5KSL6 1271 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 DENND2CQ68D51 928 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 MBLAC2Q68D91 279 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 HIBCHQ6NVY1 386 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 ERAP2Q6P179 960 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 WDR93Q6P2C0 686 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 TXNDC11Q6PKC3 985 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 MICALCLQ6ZW33 695 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 PRPF39Q86UA1 669 aaKnown RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 CCDC117Q8IWD4 279 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 AGGF1Q8N302 714 aaeCLIP10.44□□□□□ -0.74
USP39-210ENST00000459775 SLC44A3Q8N4M1 653 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 NAT8LQ8N9F0 302 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 ZNF483Q8TF39 744 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 IPCEF1Q8WWN9 437 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 ATOH1Q92858 354 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 MIEF2Q96C03 454 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 PHOX2BQ99453 314 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 PHF7Q9BWX1 381 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 ZNF700Q9H0M5 742 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 GLOD4Q9HC38 313 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
USP39-210ENST00000459775 BPTFQ12830 3046 aa10.44□□□□□ -0.74
USP39-210ENST00000459775 WASH3PC4AMC7 463 aa10.43□□□□□ -0.74
USP39-210ENST00000459775 CHADO15335 359 aa10.43□□□□□ -0.74
USP39-210ENST00000459775 ZNF821O75541 412 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms