RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SLC28A2O43868 658 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 NOBOXO60393 691 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 UBR5O95071 2799 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 RASGRP1O95267 797 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 IGSF6O95976 241 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 CYP1A1P04798 512 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 ITGB2P05107 769 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 MMEP08473 750 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 PLEKP08567 350 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 TIMP2P16035 220 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 SLC5A2P31639 672 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 UGT1A5P35504 534 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 HDAC4P56524 1084 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 GSCP56915 257 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 ELP6Q0PNE2 266 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 PTPN13Q12923 2485 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 NFATC4Q14934 902 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 LRRC14Q15048 493 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 CDO1Q16878 200 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 C15orf59Q2T9L4 293 aaPredicted RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 ALG11Q2TAA5 492 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 ZSCAN23Q3MJ62 389 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 TMEM52BQ4KMG9 183 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 RAB6CQ53S08 254 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 LRRC73Q5JTD7 316 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 FOXR1Q6PIV2 292 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 RAB11FIP2Q7L804 512 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 FBXO39Q8N4B4 442 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 RXFP2Q8WXD0 754 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 CCDC74AQ96AQ1 378 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 TMEM74Q96NL1 305 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 GFM1Q96RP9 751 aaKnown RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 TUBGCP2Q9BSJ2 902 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 STK33Q9BYT3 514 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 EDEM3Q9BZQ6 932 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 STRADBQ9C0K7 418 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 RAB6CQ9H0N0 254 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 NOL6Q9H6R4 1146 aaKnown RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 NOCTQ9UK39 431 aaKnown RBP10.54□□□□□ -0.72
HDLBP-227ENST00000458564 DOLKQ9UPQ8 538 aa10.54□□□□□ -0.72
HDLBP-227ENST00000458564 COL12A1Q99715 3063 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 NVLO15381 856 aaKnown RBP10.53□□□□□ -0.72
HDLBP-227ENST00000458564 BUB1O43683 1085 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 WISP1O95388 367 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 HTR1BP28222 390 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 INHBCP55103 352 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 YBEYP58557 167 aaPredicted RBP10.53□□□□□ -0.72
HDLBP-227ENST00000458564 CDR2Q01850 454 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 KCNC4Q03721 635 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 GRM3Q14832 879 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 TPD52L1Q16890 204 aaPredicted RBP10.53□□□□□ -0.72
HDLBP-227ENST00000458564 WSCD2Q2TBF2 565 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 PARP15Q460N3 678 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 LEKR1Q6ZMV7 388 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 GKN2Q86XP6 184 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 HID1Q8IV36 788 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 CCDC185Q8N715 623 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 RTL3Q8N8U3 475 aaKnown RBP10.53□□□□□ -0.72
HDLBP-227ENST00000458564 GPR156Q8NFN8 814 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 ATL2Q8NHH9 583 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 GPT2Q8TD30 523 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 TMEM159Q96B96 161 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 SGF29Q96ES7 293 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 RBM15Q96T37 977 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■□□□□ 11.3
HDLBP-227ENST00000458564 WRAP53Q9BUR4 548 aaKnown RBP10.53□□□□□ -0.72
HDLBP-227ENST00000458564 SYNDIG1Q9H7V2 258 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 EPB41L5Q9HCM4 733 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 GULP1Q9UBP9 304 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 APPL1Q9UKG1 709 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 DGKBQ9Y6T7 804 aa10.53□□□□□ -0.72
HDLBP-227ENST00000458564 LRP4O75096 1905 aa10.52□□□□□ -0.72
HDLBP-227ENST00000458564 FAM170AA1A519 330 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 WASH4PA8MWX3 477 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 GJB6O95452 261 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 RPLP0P05388 317 aaKnown RBP10.52□□□□□ -0.73
HDLBP-227ENST00000458564 LIPCP11150 499 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 CTSEP14091 401 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 PNLIPP16233 465 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 ITIH2P19823 946 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 ERCC5P28715 1186 aaPredicted RBP10.52□□□□□ -0.73
HDLBP-227ENST00000458564 MMP12P39900 470 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 CSRP3P50461 194 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 SRP54P61011 504 aaKnown RBP10.52□□□□□ -0.73
HDLBP-227ENST00000458564 RHOAP61586 193 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 UBE2HP62256 183 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 CCL7P80098 99 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 FMO1Q01740 532 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 ZFP36L1Q07352 338 aaKnown RBP10.52□□□□□ -0.73
HDLBP-227ENST00000458564 PTP4A2Q12974 167 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 MTM1Q13496 603 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 SERINC3Q13530 473 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 INPP5AQ14642 412 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 CAMK4Q16566 473 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 UGP2Q16851 508 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 LINC00303Q3SY05 128 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 CERCAMQ5T4B2 595 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 BRAT1Q6PJG6 821 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 TRIM72Q6ZMU5 477 aa10.52□□□□□ -0.73
HDLBP-227ENST00000458564 DNAAF5Q86Y56 855 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms