RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 MRPS31Q92665 395 aaKnown RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 TMA16Q96EY4 203 aaKnown RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 C7orf26Q96N11 449 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 CORO1BQ9BR76 489 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 SUDS3Q9H7L9 328 aaPredicted RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 MARCOQ9UEW3 520 aaPredicted RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 ASB3Q9Y575 518 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 PAPSS2O95340 614 aaPredicted RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 TGDSO95455 350 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 ADH1AP07327 375 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 PDHA1P08559 390 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 KITP10721 976 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 NCALDP61601 193 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 STX3Q13277 289 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 RBM20Q5T481 1227 aaKnown RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 BBS7Q8IWZ6 715 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 BBS5Q8N3I7 341 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 TBATAQ96M53 351 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 FAM167BQ9BTA0 163 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 TMEM120AQ9BXJ8 343 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 PLK2Q9NYY3 685 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 CFAP97Q9P2B7 532 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 MARCH4Q9P2E8 410 aaPredicted RBP16.48■□□□□ 0.23
CAPN13-203ENST00000458085 CLEC4EQ9ULY5 219 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 OR51B4Q9Y5P0 310 aa16.48■□□□□ 0.23
CAPN13-203ENST00000458085 INSIG1O15503 277 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 LATS1O95835 1130 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 PRLP01236 227 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 EPOP01588 193 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 FGF1P05230 155 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 GSTA1P08263 222 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 MYL4P12829 197 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 HLA-DPA1P20036 260 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 CSKP41240 450 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 UGP2Q16851 508 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 ARID3BQ8IVW6 561 aaPredicted RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 CENPLQ8N0S6 344 aaPredicted RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 SPATA6LQ8N4H0 392 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 OR13C4Q8NGS5 318 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 OR6P1Q8NGX9 317 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 KCTD4Q8WVF5 259 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 DNAJC1Q96KC8 554 aaKnown RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 LRRC37BQ96QE4 947 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 NDNQ99608 321 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 FEM1AQ9BSK4 669 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 UNKQ9C0B0 810 aaKnown RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 SSX2IPQ9Y2D8 614 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 SPO11Q9Y5K1 396 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 G3V2L1 256 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 TMCC1O94876 653 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 LUC7L3O95232 432 aaKnown RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 NDST3O95803 873 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 CTNNB1P35222 781 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 CD151P48509 253 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 TAS2R39P59534 338 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 CCDC15Q0P6D6 951 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 RFTN1Q14699 578 aaPredicted RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 FAM217AQ8IXS0 508 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 TMEM151AQ8N4L1 468 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 GPATCH11Q8N954 259 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 HJURPQ8NCD3 748 aaPredicted RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 PPP1R14CQ8TAE6 165 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 RAB3IL1Q8TBN0 382 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 ZNF398Q8TD17 642 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 ALG14Q96F25 216 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 PRR11Q96HE9 360 aaPredicted RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 ELMO2Q96JJ3 720 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 SLC46A2Q9BY10 475 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 ECT2Q9H8V3 914 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 SCUBE2Q9NQ36 999 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 CPSF2Q9P2I0 782 aaKnown RBP16.47■□□□□ 0.23
CAPN13-203ENST00000458085 TRIM33Q9UPN9 1127 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 PCDHGC4Q9Y5F7 938 aa16.47■□□□□ 0.23
CAPN13-203ENST00000458085 MYOFQ9NZM1 2061 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 RFPL2O75678 378 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 ARHGEF15O94989 841 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 MT-CO1P00395 513 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 SBK3P0C264 359 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 MYL2P10916 166 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 CPA3P15088 417 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 SYN1P17600 705 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 GLRBP48167 497 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 ARFIP2P53365 341 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 DLG1Q12959 904 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 ITGA9Q13797 1035 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 PTPRRQ15256 657 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 CCDC153Q494R4 210 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 CCDC149Q6ZUS6 474 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 MTDHQ86UE4 582 aaKnown RBP16.46■□□□□ 0.23
CAPN13-203ENST00000458085 APCDD1Q8J025 514 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 SP7Q8TDD2 431 aaPredicted RBP16.46■□□□□ 0.23
CAPN13-203ENST00000458085 RAD9AQ99638 391 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 NMRAL1Q9HBL8 299 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 PRKAG2Q9UGJ0 569 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 VPS28Q9UK41 221 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 CHD9Q3L8U1 2897 aa16.46■□□□□ 0.23
CAPN13-203ENST00000458085 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.45■□□□□ 0.22
CAPN13-203ENST00000458085 TK2O00142 265 aa16.45■□□□□ 0.22
CAPN13-203ENST00000458085 TLL1O43897 1013 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms