RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 DNAJB13P59910 316 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 TAF11Q15544 211 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 CCDC6Q16204 474 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 SIRPB2Q5JXA9 342 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 RBM20Q5T481 1227 aaKnown RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 TMCO4Q5TGY1 634 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 LSMEM2Q8N112 164 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 BCL7CQ8WUZ0 217 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 N4BP2L2Q92802 583 aaPredicted RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 PEX13Q92968 403 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 CNDP1Q96KN2 507 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 CEP295NLQ96MC4 621 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 PANX3Q96QZ0 392 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 CDK5RAP1Q96SZ6 601 aaKnown RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 POLR1EQ9GZS1 481 aaKnown RBP16.81■□□□□ 0.28
CCDC43-202ENST00000457422 MAN1C1Q9NR34 630 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 CREBZFQ9NS37 354 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 IGSF5Q9NSI5 407 aa16.81■□□□□ 0.28
CCDC43-202ENST00000457422 TET1Q8NFU7 2136 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 SLC38A8A6NNN8 435 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 DCXO43602 365 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 TBX10O75333 385 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 GALTP07902 379 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 TFEBP19484 476 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 OR1E1P30953 314 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 VHLP40337 213 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 ACVR1Q04771 509 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 BTKQ06187 659 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 ILF2Q12905 390 aaKnown RBP16.8■□□□□ 0.28
CCDC43-202ENST00000457422 ZNF789Q5FWF6 425 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 ALG1LQ6GMV1 187 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 PRSS55Q6UWB4 352 aaPredicted RBP16.8■□□□□ 0.28
CCDC43-202ENST00000457422 RIPOR1Q6ZS17 1223 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 CILP2Q8IUL8 1156 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 FAM126BQ8IXS8 530 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 PHTF2Q8N3S3 785 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 HEXDCQ8WVB3 486 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 SEPT8Q92599 483 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 TSPAN17Q96FV3 270 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 NAF1Q96HR8 494 aaKnown RBP16.8■□□□□ 0.28
CCDC43-202ENST00000457422 ZNF599Q96NL3 588 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 OR52B2Q96RD2 323 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 YY1AP1Q9H869 796 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 PDFQ9HBH1 243 aa16.8■□□□□ 0.28
CCDC43-202ENST00000457422 TBKBP1A7MCY6 615 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 E9PBE3 544 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 SLC22A2O15244 555 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 GRID2O43424 1007 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 CCNT2O60583 730 aaKnown RBP16.79■□□□□ 0.28
CCDC43-202ENST00000457422 KLHL41O60662 606 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 GJB3O75712 270 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 EPOP01588 193 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 ATF6P18850 670 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 ATP5F1P24539 256 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-202ENST00000457422 KCNQ1P51787 676 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 SLC25A3Q00325 362 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 KLF10Q13118 480 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 FAM83EQ2M2I3 478 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 PIWIL4Q7Z3Z4 852 aaKnown RBP16.79■□□□□ 0.28
CCDC43-202ENST00000457422 MYLK4Q86YV6 388 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-202ENST00000457422 SPNS2Q8IVW8 549 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 ACTRT2Q8TDY3 377 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 NDNQ99608 321 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 OLFM1Q99784 485 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 GPAMQ9HCL2 828 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 ZDHHC2Q9UIJ5 367 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 PITPNM1O00562 1244 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 LDB2O43679 373 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 COX4I1P13073 169 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 HLA-DPA1P20036 260 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 NSUN2Q08J23 767 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCDC43-202ENST00000457422 LAMB3Q13751 1172 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 TECRLQ5HYJ1 363 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 PGM2L1Q6PCE3 622 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 SLAIN1Q8ND83 568 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 FEM1CQ96JP0 617 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 LBHD1Q9BQE6 289 aaPredicted RBP16.79■□□□□ 0.28
CCDC43-202ENST00000457422 CCDC28BQ9BUN5 200 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 NCKIPSDQ9NZQ3 722 aa16.79■□□□□ 0.28
CCDC43-202ENST00000457422 F5H5T6 163 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 WISP3O95389 354 aaPredicted RBP16.78■□□□□ 0.28
CCDC43-202ENST00000457422 FGF1P05230 155 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 PFKPQ01813 784 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 AGAP9Q5VTM2 703 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 LGI2Q8N0V4 545 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 CPSF7Q8N684 471 aaKnown RBP16.78■□□□□ 0.28
CCDC43-202ENST00000457422 PNPLA1Q8N8W4 532 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 TXNDC5Q8NBS9 432 aaKnown RBP16.78■□□□□ 0.28
CCDC43-202ENST00000457422 SEMA3CQ99985 751 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 RTKNQ9BST9 563 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 SHCBP1LQ9BZQ2 653 aa16.78■□□□□ 0.28
CCDC43-202ENST00000457422 CCL22O00626 93 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 MUSKO15146 869 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ADAM12O43184 909 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 LTA4HP09960 611 aaKnown RBP16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ACADSP16219 412 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ATP6V1C1P21283 382 aa16.77■□□□□ 0.28
CCDC43-202ENST00000457422 ADSLP30566 484 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms