RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 CABYRO75952 493 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 MT-CYBP00156 380 aaPredicted RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 MLNP12872 115 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 TFEBP19484 476 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 MPP3Q13368 585 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 ZNF423Q2M1K9 1284 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 STXBP5Q5T5C0 1151 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 GRTP1Q5TC63 336 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 LAYNQ6UX15 382 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 LRRC8DQ7L1W4 858 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 CLEC14AQ86T13 490 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 ZBTB46Q86UZ6 589 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 CEP97Q8IW35 865 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 CNTD1Q8N815 330 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 HIC2Q96JB3 615 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 FCRL2Q96LA5 508 aaPredicted RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 RTKNQ9BST9 563 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 HMX1Q9NP08 348 aaPredicted RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 GALNT8Q9NY28 637 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 MYO16Q9Y6X6 1858 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 MOXD2PA6NHM9 499 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 MATN2O00339 956 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 F9P00740 461 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 TSPAN8P19075 237 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 SPRP35270 261 aaPredicted RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 PLK1P53350 603 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 YBX1P67809 324 aaKnown RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 PPIDQ08752 370 aaKnown RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 POU6F1Q14863 301 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 CYTH1Q15438 398 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 PITRM1Q5JRX3 1037 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 ARTNQ5T4W7 220 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 LSMEM2Q8N112 164 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 KYQ8NBH2 561 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 ZNF296Q8WUU4 475 aaPredicted RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 JADE3Q92613 823 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 SIKE1Q9BRV8 207 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 CYP4F12Q9HCS2 524 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 OXSMQ9NWU1 459 aa12.53□□□□□ -0.4
LINC00959-201ENST00000456581 RUVBL2Q9Y230 463 aaKnown RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 RANBP2P49792 3224 aaKnown RBP12.53□□□□□ -0.4
LINC00959-201ENST00000456581 C7orf72A4D263 438 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 KCNU1A8MYU2 1149 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 IGLV3-25P01717 112 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 ASLP04424 464 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 RPLP2P05387 115 aaKnown RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 HOXD10P28358 340 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 CDH15P55291 814 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 FAM189BP81408 668 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 USP10Q14694 798 aaKnown RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 PPP1R3AQ16821 1122 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 FSCBQ5H9T9 825 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 SEL1L3Q68CR1 1132 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 BNC2Q6ZN30 1099 aaPredicted RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 PDZD4Q76G19 769 aaPredicted RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 TAS1R1Q7RTX1 841 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 RNF135Q8IUD6 432 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 FSTL5Q8N475 847 aaPredicted RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 ATP6V1E2Q96A05 226 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 RPL10LQ96L21 214 aaKnown RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 LRGUKQ96M69 825 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 UROC1Q96N76 676 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 SLC39A3Q9BRY0 314 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 ILKAPQ9H0C8 392 aaPredicted RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 STN1Q9H668 368 aaKnown RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 LRRC40Q9H9A6 602 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 XPR1Q9UBH6 696 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 STK39Q9UEW8 545 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 SLC2A6Q9UGQ3 507 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 RIMS3Q9UJD0 308 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 PSMD13Q9UNM6 376 aa12.52□□□□□ -0.4
LINC00959-201ENST00000456581 PRRC2BQ5JSZ5 2229 aaKnown RBP12.52□□□□□ -0.4
LINC00959-201ENST00000456581 ARVCFO00192 962 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 ENPP3O14638 875 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 EOMESO95936 686 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 HMBSP08397 361 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 TYMPP19971 482 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 SLC5A2P31639 672 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 MAGEA12P43365 314 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 EIF4EBP2Q13542 120 aaPredicted RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CYLC2Q14093 348 aaPredicted RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CCDC153Q494R4 210 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CTXN3Q4LDR2 81 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 PIGGQ5H8A4 983 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 SPANXN3Q5MJ09 141 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 IL23RQ5VWK5 629 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CYP2R1Q6VVX0 501 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CYS1Q717R9 158 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 TFAP2DQ7Z6R9 452 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 TMEM135Q86UB9 458 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 CENPLQ8N0S6 344 aaPredicted RBP12.52□□□□□ -0.41
LINC00959-201ENST00000456581 IRGQQ8WZA9 623 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 NXNL1Q96CM4 212 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 WDR41Q9HAD4 459 aa12.52□□□□□ -0.41
LINC00959-201ENST00000456581 BFARQ9NZS9 450 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms