RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ZNF711Q9Y462 761 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 PCDHB7Q9Y5E2 793 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 SNX9Q9Y5X1 595 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 SNX8Q9Y5X2 465 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 DUSP10Q9Y6W6 482 aa5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 FNDC1Q4ZHG4 1894 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P4-201ENST00000455362 A0A0A6YYJ9 748 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 BTNL10A8MVZ5 291 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMCO5BA8MYB1 307 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 KIF2AO00139 706 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 CYB561D2O14569 222 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 KRT86O43790 486 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 KIF5CO60282 957 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 HUS1O60921 280 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TACC1O75410 805 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TSPAN9O75954 239 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 DDHD2O94830 711 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TUBB4AP04350 444 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 H2AFZP0C0S5 128 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TNNT1P13805 278 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 ATP6V1B1P15313 513 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 NPPBP16860 134 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 HDCP19113 662 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PSMA3P25788 255 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 GNL1P36915 607 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PDE6CP51160 858 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 CLCNKBP51801 687 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 NDST1P52848 882 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 COPAP53621 1224 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 DSC1Q08554 894 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 CHAF1BQ13112 559 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 MAMLD1Q13495 774 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 HABP2Q14520 560 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 MAPKAPK3Q16644 382 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 ATG16L1Q676U5 607 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 MFSD5Q6N075 450 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 DCLRE1AQ6PJP8 1040 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TRIM72Q6ZMU5 477 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 BBS12Q6ZW61 710 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 H2AFVQ71UI9 128 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 UNC93AQ86WB7 457 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 DNAAF5Q86Y56 855 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF280BQ86YH2 543 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 YAF2Q8IY57 180 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 CRYBG2Q8N1P7 616 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 RNF10Q8N5U6 811 aaKnown RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 APPL2Q8NEU8 664 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 WDR48Q8TAF3 677 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 URGCPQ8TCY9 931 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 BCL7CQ8WUZ0 217 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 RABGGTAQ92696 567 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 UBE2FQ969M7 185 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 NEIL1Q96FI4 390 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TMEM176AQ96HP8 235 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 SENP8Q96LD8 212 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 C16orf45Q96MC5 204 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 ZNF560Q96MR9 790 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 UROC1Q96N76 676 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 CASD1Q96PB1 797 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 UHRF1Q96T88 793 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 MRPL45Q9BRJ2 306 aaKnown RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PAAF1Q9BRP4 392 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PACSIN1Q9BY11 444 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 DPH1Q9BZG8 443 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PITHD1Q9GZP4 211 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 CHST8Q9H2A9 424 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 SMURF2Q9HAU4 748 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 HEYLQ9NQ87 328 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PRDM8Q9NQV8 689 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 SEPT11Q9NVA2 429 aaKnown RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TBC1D13Q9NVG8 400 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 CACNG4Q9UBN1 327 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 TRIM10Q9UDY6 481 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 HMGXB4Q9UGU5 601 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 GUCA1BQ9UMX6 200 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PCDHGB4Q9UN71 923 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 MED16Q9Y2X0 877 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 NME7Q9Y5B8 376 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 LAMA2P24043 3122 aaKnown RBP5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 PDE4DIPQ5VU43 2346 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 MYO7AQ13402 2215 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 MYO9BQ13459 2157 aa5.35□□□□□ -1.55
HMGB1P4-201ENST00000455362 ATP8B3O60423 1300 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 A0A0A6YYK5 440 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CCDC78A2IDD5 438 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CASTOR2A6NHX0 329 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 H0Y3Z8 333 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 M0QZQ0 153 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 B4GALT3O60512 393 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 PHF2O75151 1096 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 RASSF9O75901 435 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 KRT38O76015 456 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 B3GAT3O94766 335 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 LSM8O95777 96 aaKnown RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CYP1A1P04798 512 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 UNGP13051 313 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CD19P15391 556 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 CSF2RAP15509 400 aa5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 WARSP23381 471 aaKnown RBP5.34□□□□□ -1.55
HMGB1P4-201ENST00000455362 TACR1P25103 407 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms