RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 PLTPP55058 493 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 OLIG2Q13516 323 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 GAS6Q14393 721 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 NAA30Q147X3 362 aaPredicted RBP16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 ARSIQ5FYB1 569 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 DENND5AQ6IQ26 1287 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 WDR93Q6P2C0 686 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 GDPD4Q6W3E5 623 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 DSG4Q86SJ6 1040 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 LINC00523Q86TU6 105 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 OR2T3Q8NH03 318 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 HCAR2Q8TDS4 363 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 FRMD8Q9BZ67 464 aaPredicted RBP16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 CHKBQ9Y259 395 aa16.73■□□□□ 0.27
CCDC90B-202ENST00000455220 A0A1W2PQ67 120 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 USP12O75317 370 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 NDST3O95803 873 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 PDHA1P08559 390 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 MLNP12872 115 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 HLA-DPA1P20036 260 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 GRIA1P42261 906 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 MAGEA3P43357 314 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 RPL26P61254 145 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 SARNPP82979 210 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 CBLBQ13191 982 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 SLC1A5Q15758 541 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 CRY1Q16526 586 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 ARMC12Q5T9G4 340 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 LRRC8BQ6P9F7 803 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 TMEM92Q6UXU6 159 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 TRIM67Q6ZTA4 783 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 SYT13Q7L8C5 426 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 CAND1Q86VP6 1230 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 PIP4K2CQ8TBX8 421 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 PIH1D2Q8WWB5 315 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 IFT81Q8WYA0 676 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 IFT43Q96FT9 208 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 SERPINB12Q96P63 405 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 NEUROG2Q9H2A3 272 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 CHRDQ9H2X0 955 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 XAB2Q9HCS7 855 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 CASS4Q9NQ75 786 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 DKK3Q9UBP4 350 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 SARDHQ9UL12 918 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 RPL26L1Q9UNX3 145 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 ATG13O75143 517 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 PPFIA2O75334 1257 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 SATB1Q01826 763 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 ZNF805Q5CZA5 627 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 CWF19L1Q69YN2 538 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 BRAT1Q6PJG6 821 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 PPP1R21Q6ZMI0 780 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 KDELC2Q7Z4H8 507 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 ZSWIM9Q86XI8 627 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 ZCCHC9Q8N567 271 aaKnown RBP16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 OR52K1Q8NGK4 314 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 KLHL32Q96NJ5 620 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 APOL2Q9BQE5 337 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 ADGRE3Q9BY15 652 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 RAB21Q9UL25 225 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 PCDHB9Q9Y5E1 797 aa16.72■□□□□ 0.27
CCDC90B-202ENST00000455220 C1QTNF3-AMACRE9PGA6 284 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 GOLGA8MH3BSY2 632 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 AP3B1O00203 1094 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 RNASEH1O60930 286 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 FGF1P05230 155 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 TUBBP07437 444 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 ALADP13716 330 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 ITGB7P26010 798 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 CHRNA4P43681 627 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 VSNL1P62760 191 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 CDH17Q12864 832 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 ELF2Q15723 593 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 SIRPB2Q5JXA9 342 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 FAM46CQ5VWP2 391 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 ZNF776Q68DI1 518 aaPredicted RBP16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 MMAAQ8IVH4 418 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 PDCD6IPQ8WUM4 868 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 IER2Q9BTL4 223 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 PARD6BQ9BYG5 372 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 FOXP3Q9BZS1 431 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 PHACTR1Q9C0D0 580 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 MKRN2Q9H000 416 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 PPIL1Q9Y3C6 166 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 SIT1Q9Y3P8 196 aa16.71■□□□□ 0.27
CCDC90B-202ENST00000455220 ANKRD66B4E2M5 251 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 STK25O00506 426 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 ADH1BP00325 375 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 CPP00450 1065 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 IL1BP01584 269 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 MCM3P25205 808 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 MAGEA9P43362 315 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 TNNT3P45378 269 aaPredicted RBP16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 GRIA4P48058 902 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 RPS14P62263 151 aaKnown RBP16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 MSLNQ13421 630 aaPredicted RBP16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 GALNT3Q14435 633 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 HLTFQ14527 1009 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 CST6Q15828 149 aa16.7■□□□□ 0.26
CCDC90B-202ENST00000455220 CCNI2Q6ZMN8 369 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms