RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 LOC100653049A0A140TA62 436 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 GSC2O15499 205 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 KRT34O76011 436 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 RHOCP08134 193 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 SERPINF2P08697 491 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 SBK3P0C264 359 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 ACRP10323 421 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 MBL2P11226 248 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 HADHAP40939 763 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 ZNF177Q13360 481 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 RABGAP1LQ5R372 815 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 CNTN4Q8IWV2 1026 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 TEX26Q8N6G2 289 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 TEX9Q8N6V9 391 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 HEXDCQ8WVB3 486 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 SLC22A12Q96S37 553 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 CINPQ9BW66 212 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 ARNT2Q9HBZ2 717 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 OXSMQ9NWU1 459 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■■■■□ 22.2
VTA1-203ENST00000452973 LNPEPQ9UIQ6 1025 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 FNDC1Q4ZHG4 1894 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 ATXN1LP0C7T5 689 aaKnown RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 PRSS56P0CW18 603 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 GM2AP17900 193 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 HOXD9P28356 352 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 RIPK1Q13546 671 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 VEPH1Q14D04 833 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 RNF219Q5W0B1 726 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 RPS27LQ71UM5 84 aaKnown RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 ANKRD33Q7Z3H0 272 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 RYBPQ8N488 228 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 ZNF558Q96NG5 402 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 DENND2DQ9H6A0 471 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 UBA2Q9UBT2 640 aaPredicted RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 AGO1Q9UL18 857 aaKnown RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 PCDHB12Q9Y5F1 795 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 PCDHGC4Q9Y5F7 938 aa11.86□□□□□ -0.51
VTA1-203ENST00000452973 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.86□□□□□ -0.51
VTA1-203ENST00000452973 PIGNO95427 931 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SOD2P04179 222 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SERPINA6P08185 405 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CCDC166P0CW27 439 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CSF2RAP15509 400 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 PTPRRQ15256 657 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 ARL13AQ5H913 290 aaPredicted RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 ICE2Q659A1 982 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 DNAJB7Q7Z6W7 309 aaPredicted RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 PIM3Q86V86 326 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CARNMT1Q8N4J0 409 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 TMEM151AQ8N4L1 468 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 RBM15BQ8NDT2 890 aaKnown RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 PDZD8Q8NEN9 1154 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 MAPK15Q8TD08 544 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 TUBB6Q9BUF5 446 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 WDR55Q9H6Y2 383 aaPredicted RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 ANKRD6Q9Y2G4 727 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 LDB2O43679 373 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 DLX3O60479 287 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SLC8A1P32418 973 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SMAD3P84022 425 aaKnown RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 PEX6Q13608 980 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 KRT72Q14CN4 511 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 DBN1Q16643 649 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SLC9B1Q4ZJI4 515 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SPDYAQ5MJ70 313 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 TXNDC8Q6A555 127 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 ZYG11AQ6WRX3 759 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 BBS5Q8N3I7 341 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CALML6Q8TD86 181 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SH3RF2Q8TEC5 729 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 EXT2Q93063 718 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CLPTM1LQ96KA5 538 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 NUDCD1Q96RS6 583 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CDK5RAP1Q96SZ6 601 aaKnown RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 SEZ6LQ9BYH1 1024 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 MRM3Q9HC36 420 aaKnown RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 NKX1-2Q9UD57 310 aaPredicted RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 BACE2Q9Y5Z0 518 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CAPN14A8MX76 684 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SPECC1L-ADORA2AF8WAN1 911 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 H0Y626 953 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 TRAFD1O14545 582 aaPredicted RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 DCXO43602 365 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SNAP91O60641 907 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 SIN3BO75182 1162 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 ZMPSTE24O75844 475 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 URODP06132 367 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 PGM1P36871 562 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CDH4P55283 916 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 MSLNQ13421 630 aaPredicted RBP11.85□□□□□ -0.51
VTA1-203ENST00000452973 ACCSLQ4AC99 568 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 LIPMQ5VYY2 423 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CNKSR3Q6P9H4 555 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 TMC7Q7Z402 723 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 CILP2Q8IUL8 1156 aa11.85□□□□□ -0.51
VTA1-203ENST00000452973 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.85□□□□□ -0.51
VTA1-203ENST00000452973 ARL14EPQ8N8R7 260 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms