RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 DUSP12Q9UNI6 340 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ZNF451Q9Y4E5 1061 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LYVE1Q9Y5Y7 322 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 A3GALT2U3KPV4 340 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FAM240BA0A1B0GVZ2 78 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 C1orf196B1AJZ1 125 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SCAMP1O15126 338 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TO15178 435 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ADAM12O43184 909 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GMFGO60234 142 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HCN1O60741 890 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RFPL3O75679 317 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CTDNEP1O95476 244 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 OR56A5P0C7T3 313 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TGFB3P10600 412 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ETS1P14921 441 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CD53P19397 219 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MATN1P21941 496 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ADRA1DP25100 572 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PDHA2P29803 388 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CYP2C18P33260 490 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GRIA1P42261 906 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LIG4P49917 911 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HLCSP50747 726 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ATP4BP51164 291 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 VAMP7P51809 220 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CHRNEQ04844 493 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GAD2Q05329 585 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PPATQ06203 517 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PCDH1Q08174 1060 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NFX1Q12986 1120 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 TARDBPQ13148 414 aaKnown RBP eCLIP2.22□□□□□ -2.05
USP53-202ENST00000450251 GRM4Q14833 912 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 HMGN3Q15651 99 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 RBBP7Q16576 425 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FAM83EQ2M2I3 478 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TFDP3Q5H9I0 405 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ADGRD1Q6QNK2 874 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SYVN1Q86TM6 617 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 UBR7Q8N806 425 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MFSD2AQ8NA29 543 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LILRB1Q8NHL6 650 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 FANK1Q8TC84 345 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 METTL6Q8TCB7 284 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 GIMAP1Q8WWP7 306 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC13A3Q8WWT9 602 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SEC14L1Q92503 715 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CENPIQ92674 756 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 ZBED3Q96IU2 234 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 METTL2AQ96IZ6 378 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 ALPK1Q96QP1 1244 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PANX3Q96QZ0 392 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CDK5RAP1Q96SZ6 601 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 TMEM121Q9BTD3 319 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TBCDQ9BTW9 1192 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NPLQ9BXD5 320 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 ANKRD60Q9BZ19 345 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TASP1Q9H6P5 420 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 WDR26Q9H7D7 661 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 USP29Q9HBJ7 922 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 VAT1LQ9HCJ6 419 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ATP13A2Q9NQ11 1180 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TBC1D13Q9NVG8 400 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 COX16Q9P0S2 106 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 MARCOQ9UEW3 520 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 PRKAG2Q9UGJ0 569 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 LEF1Q9UJU2 399 aaPredicted RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 PCDHGC3Q9UN70 934 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 POMPQ9Y244 141 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NOSIPQ9Y314 301 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 PCDHA11Q9Y5I1 949 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ST14Q9Y5Y6 855 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CSADQ9Y600 493 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CPQQ9Y646 472 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 WASF2Q9Y6W5 498 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TULP4Q9NRJ4 1543 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PPLO60437 1756 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FAM205AQ6ZU69 1335 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 COL15A1P39059 1388 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CLCA1A8K7I4 914 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 WASH4PA8MWX3 477 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 EFCAB9A8MZ26 197 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ATP6V1G2-DDX39BF2Z307 99 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 H3BM21 787 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 M0QZ92 97 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 UBXN8O00124 270 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 STX16O14662 325 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FOXN1O15353 648 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 USP12O75317 370 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 OR2B3O76000 313 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 PRAMEF1O95521 474 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 FADS2O95864 444 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 IFNA17P01571 189 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 TFRCP02786 760 aaKnown RBP2.22□□□□□ -2.05
USP53-202ENST00000450251 CYP1A2P05177 515 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 CD2P06729 351 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 NFICP08651 508 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SERPINF2P08697 491 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 SLC2A3P11169 496 aa2.22□□□□□ -2.05
USP53-202ENST00000450251 ANXA3P12429 323 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms