RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 MDM1Q8TC05 714 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 HCAR2Q8TDS4 363 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 CXorf40AQ8TE69 158 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 NCAPGQ9BPX3 1015 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 SP110Q9HB58 689 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 PCDH12Q9NPG4 1184 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCDC197-203ENST00000449472 IP6K2Q9UHH9 426 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 IPO11Q9UI26 975 aaKnown RBP11.69□□□□□ -0.54
CCDC197-203ENST00000449472 ANAPC7Q9UJX3 599 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 COQ6Q9Y2Z9 468 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 PCDHGA1Q9Y5H4 931 aa11.69□□□□□ -0.54
CCDC197-203ENST00000449472 SHROOM3Q8TF72 1996 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 H3BRJ5 948 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 RFPL3O75679 317 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 CSF2P04141 144 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 CD48P09326 243 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 C1SP09871 688 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 JUPP14923 745 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 XPAP23025 273 aaPredicted RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 EIF4A3P38919 411 aaKnown RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 CSNK1DP48730 415 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 SCNN1BP51168 640 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 PFN3P60673 137 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 SLC25A11Q02978 314 aaKnown RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 SLC10A7Q0GE19 358 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 EIF2B5Q13144 721 aaKnown RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 ATP13A4Q4VNC1 1196 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 TP53I13Q8NBR0 393 aaPredicted RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 IQCDQ96DY2 449 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 IFT43Q96FT9 208 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 ZNF641Q96N77 438 aaPredicted RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 CSPG4P5Q96PW8 444 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 CINPQ9BW66 212 aaPredicted RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 TCEAL2Q9H3H9 227 aaPredicted RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 CCDC86Q9H6F5 360 aaKnown RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 PNMA8BQ9ULN7 279 aaPredicted RBP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 NENFQ9UMX5 172 aa11.68□□□□□ -0.54
CCDC197-203ENST00000449472 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC197-203ENST00000449472 TSPAN11A1L157 253 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 A8MX80 341 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 MYO1FO00160 1098 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 SCAMP1O15126 338 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 PEX11BO96011 259 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 ACP1P24666 158 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 HNRNPH3P31942 346 aaKnown RBP11.67□□□□□ -0.54
CCDC197-203ENST00000449472 IGFALSP35858 605 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 ARL4AP40617 200 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 SSR1P43307 286 aaKnown RBP11.67□□□□□ -0.54
CCDC197-203ENST00000449472 LIG3P49916 1009 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 ZNF135P52742 658 aaPredicted RBP11.67□□□□□ -0.54
CCDC197-203ENST00000449472 CYP4F3Q08477 520 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 TARDBPQ13148 414 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC197-203ENST00000449472 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 LBRQ14739 615 aaKnown RBP11.67□□□□□ -0.54
CCDC197-203ENST00000449472 GRM3Q14832 879 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 WSCD2Q2TBF2 565 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 NYAP1Q6ZVC0 841 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 ZSCAN30Q86W11 494 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 TMPRSS12Q86WS5 348 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 PROSER1Q86XN7 944 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 PGBD5Q8N414 524 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 LZTR1Q8N653 840 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 NIPA2Q8N8Q9 360 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 OR4C6Q8NH72 309 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 PACSIN1Q9BY11 444 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 PCDH18Q9HCL0 1135 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 ITPR1Q14643 2758 aa11.67□□□□□ -0.54
CCDC197-203ENST00000449472 LY6G6EA0A0G2JKS1 128 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 NEMP2A6NFY4 417 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 K7ESM1 405 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 MAFKO60675 156 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 GCATO75600 419 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 C6P13671 934 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 NME1P15531 152 aaKnown RBP11.66□□□□□ -0.54
CCDC197-203ENST00000449472 JUNDP17535 347 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 SUOXP51687 545 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 CDH6P55285 790 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 HNRNPKP61978 463 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCDC197-203ENST00000449472 DAB2P98082 770 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 INSM1Q01101 510 aaPredicted RBP11.66□□□□□ -0.54
CCDC197-203ENST00000449472 BCL2L1Q07817 233 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 ELP6Q0PNE2 266 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 C1orf61Q13536 156 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 KRT81Q14533 505 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 RFTN1Q14699 578 aaPredicted RBP11.66□□□□□ -0.54
CCDC197-203ENST00000449472 LRRC14Q15048 493 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 IRF4Q15306 451 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 ASTE1Q2TB18 679 aaPredicted RBP11.66□□□□□ -0.54
CCDC197-203ENST00000449472 CFAP58Q5T655 872 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 HES3Q5TGS1 186 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 ERAP2Q6P179 960 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 BRAT1Q6PJG6 821 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 TMCO3Q6UWJ1 677 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 PARGQ86W56 976 aa11.66□□□□□ -0.54
CCDC197-203ENST00000449472 RBFAQ8N0V3 343 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms