RNA–Protein interactions for RNA: ENST00000449039.5

LRRC23-210, Transcript of leucine rich repeat containing 23, human

TSL 3

Gene LRRC23, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC23-210	ENST00000449039	TSEN2	Q8NCE0	465 aa	Known RBP	20.7	■□□□□ 0.9
LRRC23-210	ENST00000449039	MDM1	Q8TC05	714 aa		20.7	■□□□□ 0.9
LRRC23-210	ENST00000449039	HSPH1	Q92598	858 aa		20.7	■□□□□ 0.9
LRRC23-210	ENST00000449039	WRAP53	Q9BUR4	548 aa	Known RBP	20.7	■□□□□ 0.9
LRRC23-210	ENST00000449039	NUP85	Q9BW27	656 aa		20.7	■□□□□ 0.9
LRRC23-210	ENST00000449039	EVA1B	Q9NVM1	165 aa		20.7	■□□□□ 0.9
LRRC23-210	ENST00000449039	FREM2	Q5SZK8	3169 aa		20.7	■□□□□ 0.9
LRRC23-210	ENST00000449039	CHD6	Q8TD26	2715 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039		A0A087X0T9	212 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	TSPAN11	A1L157	253 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	BUB1B	O60566	1050 aa	Predicted RBP	20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	GYPC	P04921	128 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	CYP1A2	P05177	515 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	FAM228B	P0C875	321 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	NME1	P15531	152 aa	Known RBP	20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	SERPINA4	P29622	427 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	RENBP	P51606	427 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	THOP1	P52888	689 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	YPEL5	P62699	121 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	E2F1	Q01094	437 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	CAMK2B	Q13554	666 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	CCDC122	Q5T0U0	273 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	ALKBH5	Q6P6C2	394 aa	Known RBP	20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	TMCO3	Q6UWJ1	677 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	POLN	Q7Z5Q5	900 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	NPW	Q8N729	165 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	NIPA2	Q8N8Q9	360 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	BTN2A2	Q8WVV5	523 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	TEKT4	Q8WW24	435 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	PCDH12	Q9NPG4	1184 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	DKK4	Q9UBT3	224 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	ANAPC7	Q9UJX3	599 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	ACACA	Q13085	2346 aa		20.69	■□□□□ 0.9
LRRC23-210	ENST00000449039	MYO1F	O00160	1098 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	RARA	P10276	462 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	JUND	P17535	347 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	AMPD1	P23109	780 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	HES3	Q5TGS1	186 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	ARHGAP36	Q6ZRI8	547 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	CAMK1D	Q8IU85	385 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	PAF1	Q8N7H5	531 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	ZNF599	Q96NL3	588 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	USP29	Q9HBJ7	922 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	SEPT3	Q9UH03	358 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	CSNK1G3	Q9Y6M4	447 aa		20.68	■□□□□ 0.9
LRRC23-210	ENST00000449039	RIOK3	O14730	519 aa	Known RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	GIMD1	P0DJR0	217 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	CKMT1A	P12532	417 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	TCF4	P15884	667 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	CASP14	P31944	242 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	IGFALS	P35858	605 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	RGR	P47804	291 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	DUSP3	P51452	185 aa	Predicted RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	POLR2L	P62875	67 aa	Known RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	BCL2L1	Q07817	233 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	CYP4F3	Q08477	520 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	LBR	Q14739	615 aa	Known RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	LRRC14	Q15048	493 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	TMCO4	Q5TGY1	634 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	FAM181A	Q8N9Y4	354 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	TP53I13	Q8NBR0	393 aa	Predicted RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	ZNF548	Q8NEK5	533 aa	Predicted RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	BTBD6	Q96KE9	485 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	CSPG4P5	Q96PW8	444 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	XPO4	Q9C0E2	1151 aa	Known RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	MBNL1	Q9NR56	388 aa	Known RBP	20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	ATP8A1	Q9Y2Q0	1164 aa		20.67	■□□□□ 0.9
LRRC23-210	ENST00000449039	PKD1L2	Q7Z442	2459 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	TMEM110-MUSTN1	A8MSY1	372 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039		K7ESM1	405 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	AQP9	O43315	295 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	CBFA2T2	O43439	604 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	LZTS3	O60299	673 aa	Predicted RBP	20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	NEBL	O76041	1014 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	SSR1	P43307	286 aa	Known RBP	20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	SCNN1B	P51168	640 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	EIF2B5	Q13144	721 aa	Known RBP	20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	TARDBP	Q13148	414 aa	Known RBP eCLIP	20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	KRT81	Q14533	505 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	HADH	Q16836	314 aa	Known RBP	20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	TPRG1L	Q5T0D9	272 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	CACTIN-AS1	Q8N1I8	211 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	LMX1A	Q8TE12	382 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	RFFL	Q8WZ73	363 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	APOLD1	Q96LR9	279 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	PSKH2	Q96QS6	385 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	CAAP1	Q9H8G2	361 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	SPAST	Q9UBP0	616 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	KLF15	Q9UIH9	416 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	COQ6	Q9Y2Z9	468 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	ANKRD36	A6QL64	1941 aa		20.66	■□□□□ 0.9
LRRC23-210	ENST00000449039	C6	P13671	934 aa		20.65	■□□□□ 0.9
LRRC23-210	ENST00000449039	SERPINB6	P35237	376 aa		20.65	■□□□□ 0.9
LRRC23-210	ENST00000449039	HSPA9	P38646	679 aa	Known RBP	20.65	■□□□□ 0.9
LRRC23-210	ENST00000449039	EIF4A3	P38919	411 aa	Known RBP	20.65	■□□□□ 0.9
LRRC23-210	ENST00000449039	LIG3	P49916	1009 aa		20.65	■□□□□ 0.9
LRRC23-210	ENST00000449039	PEX5	P50542	639 aa		20.65	■□□□□ 0.9
LRRC23-210	ENST00000449039	CLDN6	P56747	220 aa		20.65	■□□□□ 0.9
LRRC23-210	ENST00000449039	AP1S1	P61966	158 aa		20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms