RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SAGE2PA6NJ88 616 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 C16orf96A6NNT2 1141 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 TAF4O00268 1085 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 TRIM13O60858 407 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 RPL14P50914 215 aaKnown RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 WNT7BP56706 349 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 OGDHQ02218 1023 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 DGUOKQ16854 277 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SMYD5Q6GMV2 418 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 TRMT10BQ6PF06 316 aaKnown RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 ZNF598Q86UK7 904 aaKnown RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 ZBTB46Q86UZ6 589 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 EPHX4Q8IUS5 362 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SCML4Q8N228 414 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 AFAP1L2Q8N4X5 818 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SLC4A11Q8NBS3 891 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 FAM156AQ8NDB6 213 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 BPIFB6Q8NFQ5 453 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 OR6Q1Q8NGQ2 317 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SLC7A14Q8TBB6 771 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 PHF10Q8WUB8 498 aaKnown RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 ISL2Q96A47 359 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 ZNF518BQ9C0D4 1074 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 RSAD1Q9HA92 442 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 XPNPEP3Q9NQH7 507 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 STMN3Q9NZ72 180 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 TMEM216Q9P0N5 145 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 KCNN3Q9UGI6 736 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 OTOFQ9HC10 1997 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 KAT6AQ92794 2004 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 RNF103-CHMP3A0A140T963 221 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 SUPT20HL2P0C7V6 817 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 IMPDH1P20839 514 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 IL10P22301 178 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 FASP25445 335 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 TUFMP49411 452 aaKnown RBP19.33■□□□□ 0.69
HMGA1-205ENST00000447654 PLA2G16P53816 162 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 CYP24A1Q07973 514 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 INPP5AQ14642 412 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 TUBA3EQ6PEY2 450 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 RFX6Q8HWS3 928 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 ZFP90Q8TF47 636 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 TMEM143Q96AN5 459 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 PCDHAC1Q9H158 963 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 SDCBP2Q9H190 292 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 MUC3BQ9H195 1237 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 RUBCNLQ9H714 662 aa19.33■□□□□ 0.69
HMGA1-205ENST00000447654 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.33■□□□□ 0.69
HMGA1-205ENST00000447654 A6NL46 340 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 CDK2AP1O14519 115 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 DGAT1O75907 488 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 PTTG1O95997 202 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 CD1EP15812 388 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 S100A5P33763 92 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 POLR2IP36954 125 aaKnown RBP19.33■□□□□ 0.68
HMGA1-205ENST00000447654 NIPAL4Q0D2K0 466 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 SKIV2LQ15477 1246 aaKnown RBP19.33■□□□□ 0.68
HMGA1-205ENST00000447654 ZNF181Q2M3W8 571 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 CYBRD1Q53TN4 286 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 CEP78Q5JTW2 689 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 LDLRAP1Q5SW96 308 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 CCNJQ5T5M9 372 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 SLCO6A1Q86UG4 719 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 ACSF2Q96CM8 615 aaPredicted RBP19.33■□□□□ 0.68
HMGA1-205ENST00000447654 FTHL17Q9BXU8 183 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 POLR3FQ9H1D9 316 aaPredicted RBP19.33■□□□□ 0.68
HMGA1-205ENST00000447654 SLA2Q9H6Q3 261 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 ADAM28Q9UKQ2 775 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 VWA7Q9Y334 891 aa19.33■□□□□ 0.68
HMGA1-205ENST00000447654 ZSCAN5BA6NJL1 495 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 E7ENX8 843 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 TPSB2P20231 275 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 GARSP41250 739 aaKnown RBP19.32■□□□□ 0.68
HMGA1-205ENST00000447654 ADARB1P78563 741 aaKnown RBP19.32■□□□□ 0.68
HMGA1-205ENST00000447654 VAC14Q08AM6 782 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 FCHO2Q0JRZ9 810 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 PRKAA1Q13131 559 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 EIF2B5Q13144 721 aaKnown RBP19.32■□□□□ 0.68
HMGA1-205ENST00000447654 AQP6Q13520 282 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 TPSAB1Q15661 275 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.32■□□□□ 0.681e-7■■□□□ 13.3
HMGA1-205ENST00000447654 FAM45BPQ6NSW5 357 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 FAM45AQ8TCE6 357 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 POMGNT1Q8WZA1 660 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 NPAS2Q99743 824 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 RBAKQ9NYW8 714 aaPredicted RBP19.32■□□□□ 0.68
HMGA1-205ENST00000447654 TMEM181Q9P2C4 612 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 ARHGAP28Q9P2N2 729 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 PAPPA2Q9BXP8 1791 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 SOWAHBA6NEL2 793 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 HNRNPDLO14979 420 aaKnown RBP19.32■□□□□ 0.68
HMGA1-205ENST00000447654 IL12AP29459 219 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 ETV3P41162 512 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 MAGEA12P43365 314 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 PTPN9P43378 593 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 GABARAPL2P60520 117 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 GALNT1Q10472 559 aaPredicted RBP19.32■□□□□ 0.68
HMGA1-205ENST00000447654 CDK10Q15131 360 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 STXBP2Q15833 593 aa19.32■□□□□ 0.68
HMGA1-205ENST00000447654 HIST2H2ACQ16777 129 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms