RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 LEFTY1O75610 366 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 TCEA3O75764 348 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 GRAP2O75791 330 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 SMC2O95347 1197 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 GJB6O95452 261 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 IGLV3-25P01717 112 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 RRM1P23921 792 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 GNA15P30679 374 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 NEK3P51956 506 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 PMS1P54277 932 aaKnown RBP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 CDH4P55283 916 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 GCNT1Q02742 428 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 PDE1CQ14123 709 aaPredicted RBP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 SPIDRQ14159 915 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 FZD2Q14332 565 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 TAF5Q15542 800 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 EFHC1Q5JVL4 640 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 NKAPLQ5M9Q1 402 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 KIAA1161Q6NSJ0 714 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 LINGO4Q6UY18 593 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 KYAT3Q6YP21 454 aaKnown RBP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 USP53Q70EK8 1073 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 VN1R5Q7Z5H4 357 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 TMEM110Q86TL2 294 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 ARHGEF19Q8IW93 802 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 AGGF1Q8N302 714 aaeCLIP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 CHST14Q8NCH0 376 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 OR52K2Q8NGK3 314 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 OR2A12Q8NGT7 310 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 WDR48Q8TAF3 677 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 BTN2A2Q8WVV5 523 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 ZNF606Q8WXB4 792 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 GSDMAQ96QA5 445 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 TCF12Q99081 682 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 HDAC8Q9BY41 377 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 GTPBP4Q9BZE4 634 aaKnown RBP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 TRIM4Q9C037 500 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 SCAND2PQ9GZW5 306 aaPredicted RBP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 TNKS2Q9H2K2 1166 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 GOLPH3LQ9H4A5 285 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 UBE2TQ9NPD8 197 aaPredicted RBP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 SPASTQ9UBP0 616 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 IL17BQ9UHF5 180 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 VPS51Q9UID3 782 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 OR51B4Q9Y5P0 310 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 HS3ST4Q9Y661 456 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 CSNK1G3Q9Y6M4 447 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 U3KQA8 63 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 MAST4O15021 2626 aa8.09□□□□□ -1.11
LINC02549-201ENST00000445346 TDRD6O60522 2096 aaKnown RBP8.09□□□□□ -1.11
LINC02549-201ENST00000445346 CFAP46Q8IYW2 2715 aa8.09□□□□□ -1.12
LINC02549-201ENST00000445346 CCDC187A0A096LP49 1063 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 A0A1W2PNU3 283 aaPredicted RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 CDRT15L2A8MXV6 281 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 M0QYT0 321 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 PDE2AO00408 941 aaPredicted RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 TPP1O14773 563 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 SMAD6O43541 496 aaKnown RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 HSF2BPO75031 334 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 PAGE1O75459 146 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 CNTN5O94779 1100 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 ADCY5O95622 1261 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 RPLP1P05386 114 aaKnown RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 ANXA6P08133 673 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 GLI1P08151 1106 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 ADRB3P13945 408 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 OR1E1P30953 314 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 USP8P40818 1118 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 GATA4P43694 442 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 IRAK1P51617 712 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 ADKP55263 362 aaKnown RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 SNX16P57768 344 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 C1orf61Q13536 156 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 EIF4EBP2Q13542 120 aaPredicted RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 PTK2BQ14289 1009 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 FGL2Q14314 439 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 ARL13BQ3SXY8 428 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 COBLL1Q53SF7 1204 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 ESRP1Q6NXG1 681 aaKnown RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 LRRC31Q6UY01 552 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 DPY19L3Q6ZPD9 716 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 JAMLQ86YT9 394 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 DTWD1Q8N5C7 304 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 TMEM102Q8N9M5 508 aaPredicted RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 LMO3Q8TAP4 145 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 NAT6Q93015 286 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 SMARCE1Q969G3 411 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 PRR11Q96HE9 360 aaPredicted RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 SLC2A13Q96QE2 648 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 SPON2Q9BUD6 331 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 SRRTQ9BXP5 876 aaKnown RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 WDCPQ9H6R7 721 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 SYNCQ9H7C4 482 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 GULP1Q9UBP9 304 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 HOOK1Q9UJC3 728 aaKnown RBP8.08□□□□□ -1.12
LINC02549-201ENST00000445346 TBC1D30Q9Y2I9 924 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 ATP6V1DQ9Y5K8 247 aa8.08□□□□□ -1.12
LINC02549-201ENST00000445346 DOCK9Q9BZ29 2069 aa8.07□□□□□ -1.12
LINC02549-201ENST00000445346 NAV2Q8IVL1 2488 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms