RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 ANKRD6Q9Y2G4 727 aa16.92■□□□□ 0.3
SHC1-209ENST00000444664 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHC1-209ENST00000444664 hCG_1818297A0A087WSY0 165 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 IGLON5A6NGN9 336 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 UPK3BL1B0FP48 263 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 UPK3BL2E5RIL1 263 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 KCNK3O14649 394 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 VILLO15195 856 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 ARHGAP6O43182 974 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 TSPAN6O43657 245 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 CST8O60676 142 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 XPAP23025 273 aaPredicted RBP16.91■□□□□ 0.3
SHC1-209ENST00000444664 NUDT1P36639 197 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 RPS21P63220 83 aaKnown RBP16.91■□□□□ 0.3
SHC1-209ENST00000444664 SEMG2Q02383 582 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 PPIDQ08752 370 aaKnown RBP16.91■□□□□ 0.3
SHC1-209ENST00000444664 B4GALNT4Q76KP1 1039 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 LRRC8AQ8IWT6 810 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 CCDC13Q8IYE1 715 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 RCOR2Q8IZ40 523 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 TXLNBQ8N3L3 684 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 CCDC112Q8NEF3 446 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 EXD1Q8NHP7 514 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 FATE1Q969F0 183 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 ECHDC3Q96DC8 303 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 RBM41Q96IZ5 413 aaKnown RBP16.91■□□□□ 0.3
SHC1-209ENST00000444664 OLFM3Q96PB7 478 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 WRAP53Q9BUR4 548 aaKnown RBP16.91■□□□□ 0.3
SHC1-209ENST00000444664 GAREM1Q9H706 876 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 PCDH12Q9NPG4 1184 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 SAE1Q9UBE0 346 aaPredicted RBP16.91■□□□□ 0.3
SHC1-209ENST00000444664 PCDHGC4Q9Y5F7 938 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 PCDHA3Q9Y5H8 950 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 CABIN1Q9Y6J0 2220 aa16.91■□□□□ 0.3
SHC1-209ENST00000444664 PRAMEF26H0Y7S4 382 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 KCNK1O00180 336 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 TRAFD1O14545 582 aaPredicted RBP16.9■□□□□ 0.3
SHC1-209ENST00000444664 TM4SF5O14894 197 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 OPHN1O60890 802 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 HLA-DQB2P05538 268 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 CCNB1P14635 433 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 PECAM1P16284 738 aaPredicted RBP16.9■□□□□ 0.3
SHC1-209ENST00000444664 HNRNPA2B1P22626 353 aaKnown RBP16.9■□□□□ 0.3
SHC1-209ENST00000444664 CTNNA2P26232 953 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 CTSKP43235 329 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 C21orf59P57076 290 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 CCZ1BP86790 482 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
SHC1-209ENST00000444664 ITKQ08881 620 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 TRAF2Q12933 501 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 TFDP2Q14188 446 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 PDK1Q15118 436 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 UGP2Q16851 508 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 HLA-BQ31612 363 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 TFDP3Q5H9I0 405 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 BRAT1Q6PJG6 821 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 NT5DC3Q86UY8 548 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHC1-209ENST00000444664 PAF1Q8N7H5 531 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 HCAR2Q8TDS4 363 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 SEMA3CQ99985 751 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 SLC17A9Q9BYT1 436 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 DNAAF2Q9NVR5 837 aaKnown RBP16.9■□□□□ 0.3
SHC1-209ENST00000444664 RBM22Q9NW64 420 aaKnown RBP eCLIP16.9■□□□□ 0.3
SHC1-209ENST00000444664 FNDC3AQ9Y2H6 1198 aaKnown RBP16.9■□□□□ 0.3
SHC1-209ENST00000444664 TTLL3Q9Y4R7 772 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 CAPN6Q9Y6Q1 641 aa16.9■□□□□ 0.3
SHC1-209ENST00000444664 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.89■□□□□ 0.29
SHC1-209ENST00000444664 H0Y8X5 98 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 RAD51BO15315 384 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 MMP20O60882 483 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 CER1O95813 267 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 FTCDO95954 541 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 PAK4O96013 591 aaPredicted RBP16.89■□□□□ 0.29
SHC1-209ENST00000444664 JCHAINP01591 159 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 AKT2P31751 481 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 PEX5P50542 639 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 CLDN2P57739 230 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 DSC2Q02487 901 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 ELP6Q0PNE2 266 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 AP1B1Q10567 949 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 ZBTB17Q13105 803 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 IHHQ14623 411 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 STAT4Q14765 748 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 CXorf40AQ8TE69 158 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 ALG3Q92685 438 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 HAUS1Q96CS2 278 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 HERPUD2Q9BSE4 406 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 C1QTNF2Q9BXJ5 285 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 HEMGNQ9BXL5 484 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 CEP41Q9BYV8 373 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 POLR1EQ9GZS1 481 aaKnown RBP16.89■□□□□ 0.29
SHC1-209ENST00000444664 PACSIN2Q9UNF0 486 aaPredicted RBP16.89■□□□□ 0.29
SHC1-209ENST00000444664 ATP8A1Q9Y2Q0 1164 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 SPTBN2O15020 2390 aa16.89■□□□□ 0.29
SHC1-209ENST00000444664 CACNA1AO00555 2505 aa16.88■□□□□ 0.29
SHC1-209ENST00000444664 CCDC66A2RUB6 948 aa16.88■□□□□ 0.29
SHC1-209ENST00000444664 TLR4O00206 839 aa16.88■□□□□ 0.29
SHC1-209ENST00000444664 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms