RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CHD6Q8TD26 2715 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 ITPR1Q14643 2758 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 SPTY2D1-AS1A0A0U1RR47 76 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 EIF3CLB5ME19 914 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 NEMP1O14524 444 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 CASC3O15234 703 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 DAPK3O43293 454 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 MAGEC1O60732 1142 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 RFPL3O75679 317 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 GM2AP17900 193 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 IL4RP24394 825 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 EIF4A3P38919 411 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 HCAR3P49019 387 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 ARSEP51690 589 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 SLC10A7Q0GE19 358 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 EIF2B5Q13144 721 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 IRF4Q15306 451 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 ASTE1Q2TB18 679 aaPredicted RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 INAVAQ3KP66 663 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 TMEM52BQ4KMG9 183 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 CCDC122Q5T0U0 273 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 KCTD16Q68DU8 428 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 ALKBH5Q6P6C2 394 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 SRLQ86TD4 932 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 PSTKQ8IV42 348 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 RBFAQ8N0V3 343 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 CSPG4P5Q96PW8 444 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 EIF3CQ99613 913 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 SUV39H2Q9H5I1 410 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 PCDH18Q9HCL0 1135 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 MRPL47Q9HD33 250 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 PCDH12Q9NPG4 1184 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 DNAJC28Q9NX36 388 aa10.98□□□□□ -0.65
SF3A1-203ENST00000444440 IPO11Q9UI26 975 aaKnown RBP10.98□□□□□ -0.65
SF3A1-203ENST00000444440 TMEM8BA6NDV4 472 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 TRAFD1O14545 582 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-203ENST00000444440 FPGTO14772 594 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 PALMO75781 387 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 TPM1P09493 284 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 HNRNPH3P31942 346 aaKnown RBP10.97□□□□□ -0.65
SF3A1-203ENST00000444440 MMP12P39900 470 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 TAS2R40P59535 323 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 RAD51Q06609 339 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 IL10RBQ08334 325 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 RALGDSQ12967 914 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 SGCGQ13326 291 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 PDE1CQ14123 709 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-203ENST00000444440 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-203ENST00000444440 ACAP1Q15027 740 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 PTPRRQ15256 657 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 UGP2Q16851 508 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
SF3A1-203ENST00000444440 FAM182AQ5T1J6 154 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 PROSER1Q86XN7 944 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 PELI3Q8N2H9 469 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 DENND6BQ8NEG7 585 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 OR4C6Q8NH72 309 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 ZNF564Q8TBZ8 553 aaPredicted RBP10.97□□□□□ -0.65
SF3A1-203ENST00000444440 FAM71BQ8TC56 605 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 LRRN4Q8WUT4 740 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 TEKT4Q8WW24 435 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 ASB12Q8WXK4 309 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 ECHDC3Q96DC8 303 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 DNAJC7Q99615 494 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 NCAPGQ9BPX3 1015 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 SP110Q9HB58 689 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 PCDHGA1Q9Y5H4 931 aa10.97□□□□□ -0.65
SF3A1-203ENST00000444440 UNC13CQ8NB66 2214 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 TRABD2BA6NFA1 517 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 H3BRJ5 948 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 RIOK3O14730 519 aaKnown RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 MFSD11O43934 449 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 MAFKO60675 156 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 GCATO75600 419 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 TM7SF2O76062 418 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 MAP3K6O95382 1288 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 CSF2P04141 144 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 CELA2BP08218 269 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 C6P13671 934 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 NME1P15531 152 aaKnown RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 CKMT2P17540 419 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 CR2P20023 1033 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 ACP1P24666 158 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 GJC1P36383 396 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 RABIFP47224 123 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 CSNK1DP48730 415 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 MAXP61244 160 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 INSM1Q01101 510 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 ZNF211Q13398 564 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 TRIM14Q14142 442 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 IHHQ14623 411 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 LBRQ14739 615 aaKnown RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 WSCD2Q2TBF2 565 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 HES3Q5TGS1 186 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 PARGQ86W56 976 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 PLA2G15Q8NCC3 412 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 RNF214Q8ND24 703 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 ZNF548Q8NEK5 533 aaPredicted RBP10.96□□□□□ -0.65
SF3A1-203ENST00000444440 CXorf40AQ8TE69 158 aa10.96□□□□□ -0.65
SF3A1-203ENST00000444440 APOLD1Q96LR9 279 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms