RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 RIMKLBQ9ULI2 386 aa8.64□□□□□ -1.03
RER1-205ENST00000443438 SPO11Q9Y5K1 396 aa8.64□□□□□ -1.03
RER1-205ENST00000443438 VCANP13611 3396 aa8.64□□□□□ -1.03
RER1-205ENST00000443438 A0A096LPK6 155 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 SOBPA7XYQ1 873 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 H0Y626 953 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 CBX4O00257 560 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 AURKAO14965 403 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 SLC7A4O43246 635 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 FZD6O60353 706 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 TMCC1O94876 653 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 HAUS5O94927 633 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 WISP3O95389 354 aaPredicted RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 PAPLNO95428 1278 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 TGDSO95455 350 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 S1PR4O95977 384 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 RB1P06400 928 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 GSTA1P08263 222 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 SERPINF2P08697 491 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 POU2F2P09086 479 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 SBK3P0C264 359 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 FGF3P11487 239 aaPredicted RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 EPCAMP16422 314 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 PTPN2P17706 415 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 PAMP19021 973 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ALDH3A1P30838 453 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 HOXA9P31269 272 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 LEPRP48357 1165 aaKnown RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 PLK1P53350 603 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 PGGT1BP53609 377 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 IRF9Q00978 393 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 OCRLQ01968 901 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 NSUN2Q08J23 767 aaKnown RBP eCLIP8.63□□□□□ -1.03
RER1-205ENST00000443438 BST1Q10588 318 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 TRAF2Q12933 501 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 GALNT3Q14435 633 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 PTPRCAPQ14761 206 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 PCLAFQ15004 111 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 TEAD2Q15562 447 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 SLC5A9Q2M3M2 681 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 HSF5Q4G112 596 aaPredicted RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 MPPE1Q53F39 396 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ZNF789Q5FWF6 425 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 MPP7Q5T2T1 576 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 GPR158Q5T848 1215 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 LINGO4Q6UY18 593 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ATG14Q6ZNE5 492 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 KIAA0408Q6ZU52 694 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 GALNT7Q86SF2 657 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ELMOD1Q8N336 334 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 BBS5Q8N3I7 341 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 CCDC63Q8NA47 563 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 TDRD5Q8NAT2 981 aaKnown RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 GPR150Q8NGU9 434 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 RFWD2Q8NHY2 731 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 RAB3IL1Q8TBN0 382 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 PEX13Q92968 403 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 E2F7Q96AV8 911 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ZNF707Q96C28 371 aaPredicted RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 IFT43Q96FT9 208 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ATXN7L3BQ96GX2 97 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 RMDN2Q96LZ7 410 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 GPR78Q96P69 363 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 SMIM14Q96QK8 99 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 FAM167BQ9BTA0 163 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 IQCGQ9H095 443 aaKnown RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 MFSD1Q9H3U5 465 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ZNF395Q9H8N7 513 aaPredicted RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 KCNK13Q9HB14 408 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 ABCF3Q9NUQ8 709 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 KLHL14Q9P2G3 628 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 VPS51Q9UID3 782 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 LSM7Q9UK45 103 aaKnown RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 FBXO5Q9UKT4 447 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 INTS6Q9UL03 887 aaKnown RBP8.63□□□□□ -1.03
RER1-205ENST00000443438 CCL26Q9Y258 94 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 SH3BP1Q9Y3L3 701 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 RWDD3Q9Y3V2 267 aa8.63□□□□□ -1.03
RER1-205ENST00000443438 DENND4CQ5VZ89 1909 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 E2F8A0AVK6 867 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 GRXCR1A8MXD5 290 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 TARM1B6A8C7 271 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 G3V2L1 256 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 CCL22O00626 93 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 ZNF821O75541 412 aaPredicted RBP8.62□□□□□ -1.03
RER1-205ENST00000443438 FGF19O95750 216 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 MT-CO1P00395 513 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 CKMP06732 381 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 RHOP08100 348 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 PDHA1P08559 390 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 HNRNPA1P09651 372 aaKnown RBP eCLIP8.62□□□□□ -1.03
RER1-205ENST00000443438 SLC35E2BP0CK96 405 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 DDX6P26196 483 aaKnown RBP eCLIP8.62□□□□□ -1.03
RER1-205ENST00000443438 ARRB2P32121 409 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 CD70P32970 193 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 CD151P48509 253 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 SCNN1BP51168 640 aa8.62□□□□□ -1.03
RER1-205ENST00000443438 ZNF140P52738 457 aaPredicted RBP8.62□□□□□ -1.03
RER1-205ENST00000443438 NTHL1P78549 312 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms