RNA–Protein interactions for RNA: ENST00000443239.7

DNMT3B-205, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-205ENST00000443239 NT5C3BQ969T7 300 aa13.24□□□□□ -0.29
DNMT3B-205ENST00000443239 HDAC11Q96DB2 347 aa13.24□□□□□ -0.29
DNMT3B-205ENST00000443239 FAM49AQ9H0Q0 323 aaPredicted RBP13.24□□□□□ -0.29
DNMT3B-205ENST00000443239 VPS45Q9NRW7 570 aa13.24□□□□□ -0.29
DNMT3B-205ENST00000443239 SMOXQ9NWM0 555 aa13.24□□□□□ -0.29
DNMT3B-205ENST00000443239 DERAQ9Y315 318 aa13.24□□□□□ -0.29
DNMT3B-205ENST00000443239 SH3PXD2BA1X283 911 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 DFFAO00273 331 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 NRP1O14786 923 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 RECQL4O94761 1208 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 CLIC3O95833 236 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 YBX3P16989 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 NPR3P17342 541 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 KPNA2P52292 529 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 NAA20P61599 178 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 ZBTB6Q15916 424 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 CTU1Q7Z7A3 348 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 GPR180Q86V85 440 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 SPPL2CQ8IUH8 684 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 GIPC3Q8TF64 312 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 STON2Q8WXE9 905 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 PPP1R14BQ96C90 147 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 PAIP1Q9H074 479 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 ATXN3LQ9H3M9 355 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 FBRSL1Q9HCM7 1045 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 TMEM181Q9P2C4 612 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 CD300AQ9UGN4 299 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 EGFL7Q9UHF1 273 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 TMX2-CTNND1H3BSU7 103 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 STX1BP61266 288 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 ARL13BQ3SXY8 428 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 ANKDD1AQ495B1 522 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 ZBED5Q49AG3 693 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 RWDD4Q6NW29 188 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 SLC27A1Q6PCB7 646 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 CAMK1DQ8IU85 385 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 CPNE9Q8IYJ1 553 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 ANKFN1Q8N957 763 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 SHCBP1Q8NEM2 672 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 PPHLN1Q8NEY8 458 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 TRPC4APQ8TEL6 797 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 FAR2Q96K12 515 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 VAT1Q99536 393 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 TBL1YQ9BQ87 522 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 MEAF6Q9HAF1 191 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 OR12D3Q9UGF7 316 aa13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 MRPL42Q9Y6G3 142 aaKnown RBP13.23□□□□□ -0.29
DNMT3B-205ENST00000443239 YJEFN3A6XGL0 299 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 AP3B1O00203 1094 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 AURKAO14965 403 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 ATP6V1B2P21281 511 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 HOXA11P31270 313 aaPredicted RBP13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 SOX11P35716 441 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 CD151P48509 253 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 GPR107Q5VW38 600 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 ARMCX2Q7L311 632 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 LINC01465Q8N7H1 131 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 EDEM1Q92611 657 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 RNF34Q969K3 372 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 FICDQ9BVA6 458 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 ULBP1Q9BZM6 244 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 CXorf21Q9HAI6 301 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 FAIMQ9NVQ4 179 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 UBQLN1Q9UMX0 589 aaKnown RBP13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 PPP2R3BQ9Y5P8 575 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 RAD54BQ9Y620 910 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 A0A087X1B8 175 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 A8MT66 165 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 NR5A2O00482 541 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 IPO13O94829 963 aaKnown RBP13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 BMP2P12643 396 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 CPB1P15086 417 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 GALNT2Q10471 571 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 PPIL2Q13356 520 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 GEN1Q17RS7 908 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 SLC44A4Q53GD3 710 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 ANKRD23Q86SG2 305 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 PPP1R13LQ8WUF5 828 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 UHRF1Q96T88 793 aaPredicted RBP13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 ADI1Q9BV57 179 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 BRD8Q9H0E9 1235 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 WDCPQ9H6R7 721 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 WDR6Q9NNW5 1121 aaKnown RBP13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 FBXW11Q9UKB1 542 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 SARDHQ9UL12 918 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 SH3GLB1Q9Y371 365 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 TRAF6Q9Y4K3 522 aa13.22□□□□□ -0.29
DNMT3B-205ENST00000443239 CITO14578 2027 aa13.21□□□□□ -0.29
DNMT3B-205ENST00000443239 FAM155AB1AL88 458 aaPredicted RBP13.21□□□□□ -0.29
DNMT3B-205ENST00000443239 C9JVG2 144 aa13.21□□□□□ -0.29
DNMT3B-205ENST00000443239 PMPCBO75439 489 aa13.21□□□□□ -0.29
DNMT3B-205ENST00000443239 ZNF189O75820 626 aaPredicted RBP13.21□□□□□ -0.29
DNMT3B-205ENST00000443239 FYNP06241 537 aa13.21□□□□□ -0.29
DNMT3B-205ENST00000443239 TAF6P49848 677 aa13.21□□□□□ -0.29
DNMT3B-205ENST00000443239 DNAJB13P59910 316 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms