RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 GALCP54803 685 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 IKQ13123 557 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CNGA3Q16281 694 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TXNRD1Q16881 649 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 COL28A1Q2UY09 1125 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SETMARQ53H47 684 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CXorf66Q5JRM2 361 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM171A1Q5VUB5 890 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ARMC6Q6NXE6 501 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 SDCCAG8Q86SQ7 713 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 GLRX5Q86SX6 157 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CCDC170Q8IYT3 715 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DRAXINQ8NBI3 349 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 IPMKQ8NFU5 416 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 FBXL20Q96IG2 436 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF845Q96IR2 970 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 HIC2Q96JB3 615 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ADAD1Q96M93 576 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DGAT2Q96PD7 388 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF347Q96SE7 839 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 MMS19Q96T76 1030 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TCHPQ9BT92 498 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TUBB6Q9BUF5 446 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ABHD14AQ9BUJ0 271 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM129AQ9BZQ8 928 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 IQCGQ9H095 443 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 PDZD7Q9H5P4 517 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 KIF9Q9HAQ2 790 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 TBCCD1Q9NVR7 557 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DLL3Q9NYJ7 618 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 OGFRQ9NZT2 677 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 DLGAP2Q9P1A6 1054 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 CLIP2Q9UDT6 1046 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 ATP6V0A2Q9Y487 856 aa4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 V9GYY5 206 aaPredicted RBP4.23□□□□□ -1.73
CDC42BPA-207ENST00000441725 MYO15BQ96JP2 1530 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SCRIBQ14160 1630 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 ARHGAP10A1A4S6 786 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 PATE3B3GLJ2 98 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 CLIC1O00299 241 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 PRICKLE3O43900 615 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 E2F6O75461 281 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SLU7O95391 586 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 APBB3O95704 486 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 GUCA1CO95843 209 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 TSPAN15O95858 294 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 DESP17661 470 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 NR4A1P22736 598 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 ATP5DP30049 168 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 GP5P40197 560 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 LIMK1P53667 647 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 CSE1LP55060 971 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 HDAC4P56524 1084 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 RHAGQ02094 409 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SNTB1Q13884 538 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 WSCD2Q2TBF2 565 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 TTC31Q49AM3 519 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 CAVIN1Q6NZI2 390 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 AADACL2Q6P093 401 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SUSD1Q6UWL2 747 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 CIR1Q86X95 450 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 EPHX4Q8IUS5 362 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SFTPA1Q8IWL2 248 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 NUP93Q8N1F7 819 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 AMER2Q8N7J2 671 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 ABHD11Q8NFV4 315 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SPATA18Q8TC71 538 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 GDPD5Q8WTR4 605 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 DEPDC1BQ8WUY9 529 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 TFAP2BQ92481 460 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 IP6K1Q92551 441 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 TMCO6Q96DC7 493 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 FAM89AQ96GI7 184 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 MMTAG2Q9BU76 263 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 PLK3Q9H4B4 646 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZNF304Q9HCX3 659 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 TXNRD2Q9NNW7 524 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SEC63Q9UGP8 760 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 LAMP5Q9UJQ1 280 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 DHDHQ9UQ10 334 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 DTX4Q9Y2E6 619 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 EPN1Q9Y6I3 576 aaPredicted RBP4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 KAT6AQ92794 2004 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SYNJ2O15056 1496 aa4.22□□□□□ -1.73
CDC42BPA-207ENST00000441725 SCAMP1O15126 338 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 PAPSS1O43252 624 aaPredicted RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 NUAK1O60285 661 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 LETM1O95202 739 aaPredicted RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 BAG2O95816 211 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 ABCB1P08183 1280 aaPredicted RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 TGM2P21980 687 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 TPD52P55327 224 aaPredicted RBP4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 TAP1Q03518 808 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 ERCC6LQ2NKX8 1250 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 ZSCAN23Q3MJ62 389 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 LAIR1Q6GTX8 287 aa4.21□□□□□ -1.73
CDC42BPA-207ENST00000441725 KRT80Q6KB66 452 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms