RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 UBDO15205 165 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 BCAS1O75363 584 aaPredicted RBP7.59□□□□□ -1.19
HDAC9-214ENST00000441542 JRKO75564 520 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 KRT8P05787 483 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 GPD1P21695 349 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 DCKP27707 260 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 GTF2E2P29084 291 aaKnown RBP7.59□□□□□ -1.19
HDAC9-214ENST00000441542 IST1P53990 364 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 KRT76Q01546 638 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 SLC12A1Q13621 1099 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 ZNF846Q147U1 533 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 VPS26BQ4G0F5 336 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 ANKRD34AQ69YU3 496 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 JADE1Q6IE81 842 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 APOBEC3HQ6NTF7 200 aaKnown RBP7.59□□□□□ -1.19
HDAC9-214ENST00000441542 SH3BP5LQ7L8J4 393 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 STK32CQ86UX6 486 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 XYLT1Q86Y38 959 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 BRSK2Q8IWQ3 736 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 ALDH16A1Q8IZ83 802 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 RYBPQ8N488 228 aaPredicted RBP7.59□□□□□ -1.19
HDAC9-214ENST00000441542 ITPKCQ96DU7 683 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 ITCHQ96J02 903 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 RNF145Q96MT1 663 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 RIT2Q99578 217 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 COQ7Q99807 217 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 SNRNP25Q9BV90 132 aaKnown RBP7.59□□□□□ -1.19
HDAC9-214ENST00000441542 NIF3L1Q9GZT8 377 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 TMPRSS4Q9NRS4 437 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 ADPRHL2Q9NX46 363 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 CACNA2D2Q9NY47 1150 aa7.59□□□□□ -1.19
HDAC9-214ENST00000441542 SCHIP1Q9P0W5 487 aaPredicted RBP7.59□□□□□ -1.19
HDAC9-214ENST00000441542 DDX60LQ5H9U9 1706 aaKnown RBP7.59□□□□□ -1.2
HDAC9-214ENST00000441542 MSI1O43347 362 aaKnown RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 INMTO95050 263 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CHRNB1P11230 501 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 TGM2P21980 687 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 FSHRP23945 695 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 PSMA4P25789 261 aaKnown RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CCND2P30279 289 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 SHMT2P34897 504 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 PLA2G16P53816 162 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 YWHAEP62258 255 aaKnown RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 IFITM2Q01629 132 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CDK18Q07002 472 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 PDK2Q15119 407 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 GPR162Q16538 588 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CERCAMQ5T4B2 595 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 TRNP1Q6NT89 227 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 RALGPS2Q86X27 583 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 SCUBE3Q8IX30 993 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 PAF1Q8N7H5 531 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 APPL2Q8NEU8 664 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CMASQ8NFW8 434 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 OR2T34Q8NGX1 318 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 OR2T3Q8NH03 318 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 NDNFQ8TB73 568 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 TRPC4APQ8TEL6 797 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 SH3GL1Q99961 368 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 C17orf80Q9BSJ5 609 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 FUNDC2Q9BWH2 189 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 B3GNT5Q9BYG0 378 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 ATP13A3Q9H7F0 1226 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 WDR6Q9NNW5 1121 aaKnown RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CHST12Q9NRB3 414 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 KLHL3Q9UH77 587 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 BAG5Q9UL15 447 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CAB39Q9Y376 341 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 UBR2Q8IWV8 1755 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 ATAD5Q96QE3 1844 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 SYCE1LA8MT33 242 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 MEN1O00255 615 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 DHX15O43143 795 aaKnown RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 NOBOXO60393 691 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 HUS1O60921 280 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 DAB1O75553 588 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CDH1P12830 882 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 ENDOUP21128 410 aaKnown RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 PSMB9P28065 219 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 FMO4P31512 558 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 SPRP35270 261 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 GRM3Q14832 879 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 RPS6KA2Q15349 733 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 MEP1AQ16819 746 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CCDC58Q4VC31 144 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 COLEC12Q5KU26 742 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 SNAP47Q5SQN1 464 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 ARHGAP17Q68EM7 881 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 PPP4R4Q6NUP7 873 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 FAM117BQ6P1L5 589 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 ERMP1Q7Z2K6 904 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 R3HCC1LQ7Z5L2 792 aaKnown RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 ABI1Q8IZP0 508 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 C7orf31Q8N865 590 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 SUN5Q8TC36 379 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 EMID1Q96A84 441 aaPredicted RBP7.58□□□□□ -1.2
HDAC9-214ENST00000441542 CTRCQ99895 268 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 UNC93B1Q9H1C4 597 aa7.58□□□□□ -1.2
HDAC9-214ENST00000441542 NEK6Q9HC98 313 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms