RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ZNF229Q9UJW7 825 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 TNFSF13BQ9Y275 285 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
PMS1-213ENST00000441310 SMPD1P17405 629 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 SLC26A2P50443 739 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 RPL14P50914 215 aaKnown RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 CLCQ05315 142 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 RFTN1Q14699 578 aaPredicted RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 ANKRD13BQ86YJ7 626 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 OR13F1Q8NGS4 319 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 UBA3Q8TBC4 463 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 PGLYRP2Q96PD5 576 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 PEBP4Q96S96 227 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 C16orf70Q9BSU1 422 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 PDZD7Q9H5P4 517 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 CAB39LQ9H9S4 337 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 FIS1Q9Y3D6 152 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 TCRBV3S1A0A5B6 114 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 AURKAO14965 403 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 ERVK-10P10266 1014 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 HSPA8P11142 646 aaKnown RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 TFEBP19484 476 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 PRKAA2P54646 552 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 MAPRE1Q15691 268 aaKnown RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 CDO1Q16878 200 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 SLC10A6Q3KNW5 377 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 LILRB4Q8NHJ6 448 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 RNF38Q9H0F5 515 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 VRTNQ9H8Y1 702 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 ZDHHC2Q9UIJ5 367 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 G3V2L1 256 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 GRID2O43424 1007 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 TRUB2O95900 331 aaKnown RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 HMGCRP04035 888 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 ALOX5P09917 674 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 NCAM1P13591 858 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 ARSAP15289 507 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 AP3M2P53677 418 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 TMBIM6P55061 237 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 SPCS2Q15005 226 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 SLC36A3Q495N2 470 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 TBCELQ5QJ74 424 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 GPR142Q7Z601 462 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 IQCF2Q8IXL9 164 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 CPSF7Q8N684 471 aaKnown RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 CNTD1Q8N815 330 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 FNIP1Q8TF40 1166 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 HMG20AQ9NP66 347 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 PRMT7Q9NVM4 692 aaPredicted RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 IFT80Q9P2H3 777 aaPredicted RBP16.92■□□□□ 0.3
PMS1-213ENST00000441310 CPA4Q9UI42 421 aa16.92■□□□□ 0.3
PMS1-213ENST00000441310 LOC285556D6RIA3 1793 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 KPNA7A9QM74 516 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 B4GALT4O60513 344 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 GRSF1Q12849 480 aaKnown RBP eCLIP16.91■□□□□ 0.3
PMS1-213ENST00000441310 ARL13AQ5H913 290 aaPredicted RBP16.91■□□□□ 0.3
PMS1-213ENST00000441310 IQSEC1Q6DN90 963 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 ERMP1Q7Z2K6 904 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 EXOC8Q8IYI6 725 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 SLC39A3Q9BRY0 314 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 UPF3AQ9H1J1 476 aaKnown RBP16.91■□□□□ 0.3
PMS1-213ENST00000441310 MGAMO43451 1857 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 PHGDHO43175 533 aaKnown RBP16.91■□□□□ 0.3
PMS1-213ENST00000441310 BCAR1P56945 870 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 AMHR2Q16671 573 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 INSCQ1MX18 579 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 ATAD3BQ5T9A4 648 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 PRR23BQ6ZRT6 265 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 DCLK2Q8N568 766 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 IL12RB2Q99665 862 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 PTPN18Q99952 460 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 CDHR5Q9HBB8 845 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 MYO18AQ92614 2054 aaKnown RBP16.91■□□□□ 0.3
PMS1-213ENST00000441310 TRIM64A6NGJ6 449 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 TMEM233B4DJY2 109 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 MGEA5O60502 916 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 LSM8O95777 96 aaKnown RBP16.91■□□□□ 0.3
PMS1-213ENST00000441310 CHRNB1P11230 501 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 BMP2P12643 396 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 TGM1P22735 817 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 NIPAL4Q0D2K0 466 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 TFDP2Q14188 446 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 HERC3Q15034 1050 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 SURF1Q15526 300 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 DGKDQ16760 1214 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 ZNF484Q5JVG2 852 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 TAS2R42Q7RTR8 314 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 DHFR2Q86XF0 187 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 PLD5Q8N7P1 536 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 MFSD2AQ8NA29 543 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 HEXIM2Q96MH2 286 aaKnown RBP16.91■□□□□ 0.3
PMS1-213ENST00000441310 UHRF1Q96T88 793 aaPredicted RBP16.91■□□□□ 0.3
PMS1-213ENST00000441310 UNC93B1Q9H1C4 597 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 ZNF385DQ9H6B1 395 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 PKD2L2Q9NZM6 624 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 OAZ3Q9UMX2 235 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 RAP2CQ9Y3L5 183 aa16.91■□□□□ 0.3
PMS1-213ENST00000441310 GRIK4Q16099 956 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 PIGZQ86VD9 579 aa16.9■□□□□ 0.3
PMS1-213ENST00000441310 SLC22A16Q86VW1 577 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms