RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 MMP13P45452 471 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 GALNT2Q10471 571 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 TCEAL1Q15170 157 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 ODF2Q5BJF6 829 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 MARC1Q5VT66 337 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 ERAP2Q6P179 960 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 KYAT3Q6YP21 454 aaKnown RBP24.24■■□□□ 1.47
CPNE1-217ENST00000439669 Q6ZSR6 202 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 ABI3BPQ7Z7G0 1075 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 ZSWIM9Q86XI8 627 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 LRRC49Q8IUZ0 686 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 CDC6Q99741 560 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 SCUBE2Q9NQ36 999 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 HYOU1Q9Y4L1 999 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 PCDHA13Q9Y5I0 950 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 HS3ST3A1Q9Y663 406 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 TTC24A2A3L6 582 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-217ENST00000439669 FPGTO14772 594 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 SPOPO43791 374 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 TM7SF2O76062 418 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 LCA5LO95447 670 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 PRKCGP05129 697 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 SLC1A1P43005 524 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 RXRGP48443 463 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 PGBD5Q8N414 524 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 PQLC3Q8N755 202 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 DENND6BQ8NEG7 585 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 FAM174AQ8TBP5 190 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.23■■□□□ 1.47
CPNE1-217ENST00000439669 ASB12Q8WXK4 309 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 MGME1Q9BQP7 344 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 C1QTNF7Q9BXJ2 289 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 ATP8A1Q9Y2Q0 1164 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 SHROOM3Q8TF72 1996 aa24.23■■□□□ 1.47
CPNE1-217ENST00000439669 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-217ENST00000439669 POM121BA6NF01 834 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 SOWAHDA6NJG2 315 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 MAXP61244 160 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 GBE1Q04446 702 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 TMEM52BQ4KMG9 183 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 TIGD7Q6NT04 549 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-217ENST00000439669 RHOT1Q8IXI2 618 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 BAHD1Q8TBE0 780 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-217ENST00000439669 SAP25Q8TEE9 199 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 BMFQ96LC9 184 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 LENG8Q96PV6 779 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-217ENST00000439669 RNF157Q96PX1 679 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 NUDCD1Q96RS6 583 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 KLF6Q99612 283 aaPredicted RBP24.22■■□□□ 1.47
CPNE1-217ENST00000439669 NT5MQ9NPB1 228 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 TFR2Q9UP52 801 aa24.22■■□□□ 1.47
CPNE1-217ENST00000439669 RIOK3O14730 519 aaKnown RBP24.21■■□□□ 1.47
CPNE1-217ENST00000439669 SDC3O75056 442 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 IPO7O95373 1038 aaKnown RBP24.21■■□□□ 1.47
CPNE1-217ENST00000439669 FTH1P19P0C7X4 201 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 COMTP21964 271 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 SEMG2Q02383 582 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 BNIP3Q12983 259 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 IFI16Q16666 785 aaKnown RBP24.21■■□□□ 1.47
CPNE1-217ENST00000439669 LRRC38Q5VT99 294 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 GLRX5Q86SX6 157 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 TMTC1Q8IUR5 882 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 SLC22A18ASQ8N1D0 253 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 ECHDC3Q96DC8 303 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 NSMCE3Q96MG7 304 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 ZNF830Q96NB3 372 aaPredicted RBP24.21■■□□□ 1.47
CPNE1-217ENST00000439669 ANKRD36A6QL64 1941 aa24.21■■□□□ 1.47
CPNE1-217ENST00000439669 NEBLO76041 1014 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 CR2P20023 1033 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 MX2P20592 715 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 MMP12P39900 470 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 RABIFP47224 123 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 SHC2P98077 582 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 DCP2Q8IU60 420 aaKnown RBP24.2■■□□□ 1.46
CPNE1-217ENST00000439669 PDCD6IPQ8WUM4 868 aaKnown RBP24.2■■□□□ 1.46
CPNE1-217ENST00000439669 RNF25Q96BH1 459 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-217ENST00000439669 MAK16Q9BXY0 300 aaKnown RBP24.2■■□□□ 1.46
CPNE1-217ENST00000439669 NOD2Q9HC29 1040 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 DDX56Q9NY93 547 aaKnown RBP24.2■■□□□ 1.46
CPNE1-217ENST00000439669 FTSJ1Q9UET6 329 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 APOBEC2Q9Y235 224 aaKnown RBP24.2■■□□□ 1.46
CPNE1-217ENST00000439669 COQ6Q9Y2Z9 468 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 PCDHGC4Q9Y5F7 938 aa24.2■■□□□ 1.46
CPNE1-217ENST00000439669 EPN1Q9Y6I3 576 aaPredicted RBP24.2■■□□□ 1.46
CPNE1-217ENST00000439669 GOLGA8CPA6NN73 597 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 ZNF487B1APH4 448 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 TRAFD1O14545 582 aaPredicted RBP24.19■■□□□ 1.46
CPNE1-217ENST00000439669 SOCS5O75159 536 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 NDUFA10O95299 355 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 TOP3BO95985 862 aaKnown RBP24.19■■□□□ 1.46
CPNE1-217ENST00000439669 C6P13671 934 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 FECHP22830 423 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 IGFALSP35858 605 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 HADHBP55084 474 aaKnown RBP24.19■■□□□ 1.46
CPNE1-217ENST00000439669 POLR2LP62875 67 aaKnown RBP24.19■■□□□ 1.46
CPNE1-217ENST00000439669 ITKQ08881 620 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 KDM7AQ6ZMT4 941 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 EID2Q8N6I1 236 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 LRRN4Q8WUT4 740 aa24.19■■□□□ 1.46
CPNE1-217ENST00000439669 GOLPH3Q9H4A6 298 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms