RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 DENND6AQ8IWF6 608 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 FCRL3Q96P31 734 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 ACE2Q9BYF1 805 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 EFCAB1Q9HAE3 211 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 AASSQ9UDR5 926 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 PNMA8BQ9ULN7 279 aaPredicted RBP10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 SCN1AP35498 2009 aa10.02□□□□□ -0.8
CDC42SE1-202ENST00000439374 TRIP11Q15643 1979 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 SSC5DA1L4H1 1573 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NUP214P35658 2090 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NCF1BA6NI72 391 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NCF1CA8MVU1 366 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 CCNT2O60583 730 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 ATE1O95260 518 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NCF1P14598 390 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NMBRP28336 390 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NOS2P35228 1153 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 SPRP35270 261 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 SERPINB9P50453 376 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 MPP1Q00013 466 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 DNAJC14Q6Y2X3 702 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NCCRP1Q6ZVX7 275 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 KCNMB4Q86W47 210 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 MIER2Q8N344 545 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 TTC39CQ8N584 583 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 SGCDQ92629 289 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 LRCH3Q96II8 777 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 CCDC138Q96M89 665 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 KLHL5Q96PQ7 755 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 HERC2P3Q9BVR0 1158 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 DUSP16Q9BY84 665 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NACA2Q9H009 215 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 NOL6Q9H6R4 1146 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 CXorf21Q9HAI6 301 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 PLAC1Q9HBJ0 212 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 MTMR10Q9NXD2 777 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 RNF11Q9Y3C5 154 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 CLOCKO15516 846 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 SOAT2O75908 522 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 BAIAP3O94812 1187 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 ENDOD1O94919 500 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 S100BP04271 92 aaPredicted RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 PTPN7P35236 360 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 DPYSL2Q16555 572 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZNF792Q3KQV3 632 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 AARS2Q5JTZ9 985 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 KYAT3Q6YP21 454 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 CLEC20AQ6ZU45 233 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 ARMCX6Q7L4S7 300 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZC3H7AQ8IWR0 971 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 TMEM209Q96SK2 561 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 GPATCH1Q9BRR8 931 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 SYT17Q9BSW7 474 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 DHRS4Q9BTZ2 278 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 FTHL17Q9BXU8 183 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 DNAJC28Q9NX36 388 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 CEPT1Q9Y6K0 416 aa10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 LAMA2P24043 3122 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-202ENST00000439374 TRDMT1O14717 391 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 GMNNO75496 209 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 LRIG2O94898 1065 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 CD52P31358 61 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 GP5P40197 560 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 ENPEPQ07075 957 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 ITGA7Q13683 1181 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 KYAT1Q16773 422 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 ATPAF2Q8N5M1 289 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 HTRA1Q92743 480 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZFRQ96KR1 1074 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 SPON2Q9BUD6 331 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 LRRC40Q9H9A6 602 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZFYVE28Q9HCC9 887 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 RBM22Q9NW64 420 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 STK39Q9UEW8 545 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 BTRCQ9Y297 605 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 MAGED1Q9Y5V3 778 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 RGSL1A5PLK6 1076 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 FBP2O00757 339 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 SOCS2O14508 198 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 CRCPO75575 148 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 SUPT7LO94864 414 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 FBXO21O94952 628 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 PGAM1P18669 254 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 HALP42357 657 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 SLC18A1P54219 525 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 TUBB3Q13509 450 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 FASTKQ14296 549 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 METTL23Q86XA0 190 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 NPWQ8N729 165 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 ZBTB8BQ8NAP8 495 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 FNDC8Q8TC99 324 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 URGCPQ8TCY9 931 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 ESAMQ96AP7 390 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 QKIQ96PU8 341 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 INIPQ9NRY2 104 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 MIOSQ9NXC5 875 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 FZD10Q9ULW2 581 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 NRCAMQ92823 1304 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 LRPAP1P30533 357 aa10.01□□□□□ -0.81
CDC42SE1-202ENST00000439374 SEPHS1P49903 392 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms