RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CHRM3P20309 590 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 NR4A1P22736 598 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 LRPAP1P30533 357 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 OXCT1P55809 520 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 PRPSAP1Q14558 356 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 PSTKQ8IV42 348 aaKnown RBP13.66□□□□□ -0.22
PCNX3-202ENST00000439247 SLC15A4Q8N697 577 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 COPS5Q92905 334 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 ABHD8Q96I13 439 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 VPS45Q9NRW7 570 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 A0A087WZ62 844 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 RNF103-CHMP3A0A140T963 221 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 AURKAO14965 403 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 TIMM44O43615 452 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 LMO2P25791 158 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 MLLT10P55197 1068 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 ZBTB17Q13105 803 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 CAPRIN1Q14444 709 aaKnown RBP13.66□□□□□ -0.22
PCNX3-202ENST00000439247 TBCELQ5QJ74 424 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 ZNF618Q5T7W0 954 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 FAM160B1Q5W0V3 765 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 DNERQ8NFT8 737 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 SEPT1Q8WYJ6 367 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 FDXACB1Q9BRP7 624 aaPredicted RBP13.66□□□□□ -0.22
PCNX3-202ENST00000439247 GPATCH1Q9BRR8 931 aaKnown RBP13.66□□□□□ -0.22
PCNX3-202ENST00000439247 MCMBPQ9BTE3 642 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 VTI1BQ9UEU0 232 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 OAZ3Q9UMX2 235 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 SLC45A1Q9Y2W3 748 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 MTF2Q9Y483 593 aaPredicted RBP13.66□□□□□ -0.22
PCNX3-202ENST00000439247 SNX10Q9Y5X0 201 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 PTGDR2Q9Y5Y4 395 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 V9GYQ6 96 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 HACD1B0YJ81 288 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 H2AFYO75367 372 aaKnown RBP13.66□□□□□ -0.22
PCNX3-202ENST00000439247 AP2A1O95782 977 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 PTPN9P43378 593 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 GLUD2P49448 558 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 BCAP31P51572 246 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 ANKRD26P1Q6NSI1 321 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 KCTD8Q6ZWB6 473 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 KDELC2Q7Z4H8 507 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 BTLAQ7Z6A9 289 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 RETREG3Q86VR2 466 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 SNX29P2Q8IUI4 249 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 DDHD1Q8NEL9 900 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 USP33Q8TEY7 942 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 PHF21BQ96EK2 531 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 KIF12Q96FN5 646 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 TSNARE1Q96NA8 513 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 GPR78Q96P69 363 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 PARK7Q99497 189 aaKnown RBP13.66□□□□□ -0.22
PCNX3-202ENST00000439247 GPR22Q99680 433 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 TNFSF13BQ9Y275 285 aa13.66□□□□□ -0.22
PCNX3-202ENST00000439247 UBDO15205 165 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 INHBBP09529 407 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 NFKB1P19838 968 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 MATN1P21941 496 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 MERTKQ12866 999 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 ZNF829Q3KNS6 432 aaPredicted RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 DCLRE1AQ6PJP8 1040 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 CTU1Q7Z7A3 348 aaKnown RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 TCF12Q99081 682 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 MROH8Q9H579 483 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 VRTNQ9H8Y1 702 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 CHST12Q9NRB3 414 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 H0YJX3 145 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 SLC22A2O15244 555 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 VTNP04004 478 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 HSPA1AP0DMV8 641 aaKnown RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 HSPA1BP0DMV9 641 aaKnown RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 EDNRBP24530 442 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 ICAM3P32942 547 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 NDUFV1P49821 464 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 ITGADQ13349 1161 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 TAF1CQ15572 869 aaPredicted RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 OTUD1Q5VV17 481 aaPredicted RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 SYPL2Q5VXT5 272 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 EGFLAMQ63HQ2 1017 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 FBXO16Q8IX29 292 aaPredicted RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 NPWQ8N729 165 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 HEXDCQ8WVB3 486 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 SGCDQ92629 289 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 BORCS5Q969J3 196 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 PBXIP1Q96AQ6 731 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 VPS50Q96JG6 964 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 MAELQ96JY0 434 aaKnown RBP13.65□□□□□ -0.22
PCNX3-202ENST00000439247 CROTQ9UKG9 612 aa13.65□□□□□ -0.22
PCNX3-202ENST00000439247 I6L893 689 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ATICP31939 592 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 GNL1P36915 607 aaPredicted RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 OTOP3Q7RTS5 596 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ERMP1Q7Z2K6 904 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 CMTR2Q8IYT2 770 aaKnown RBP13.64□□□□□ -0.23
PCNX3-202ENST00000439247 ANKFN1Q8N957 763 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 SHCBP1Q8NEM2 672 aa13.64□□□□□ -0.23
PCNX3-202ENST00000439247 UHRF1Q96T88 793 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms