RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 HES2Q9Y543 173 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 MYO10Q9HD67 2058 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 RGPD5Q99666 1765 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 USP12O75317 370 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 GJB6O95452 261 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 BCL10O95999 233 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 EPORP19235 508 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 MPPE1Q53F39 396 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 PHYKPLQ8IUZ5 450 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 CACTIN-AS1Q8N1I8 211 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 FBXO22Q8NEZ5 403 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 SLC38A2Q96QD8 506 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 FERD3LQ96RJ6 166 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 FBXO6Q9NRD1 293 aaPredicted RBP15.96■□□□□ 0.15
PTPN13-204ENST00000436978 hCG_1818297A0A087WSY0 165 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 ULK1O75385 1050 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 CLDN11O75508 207 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 IDO1P14902 403 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 PPIGQ13427 754 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTPN13-204ENST00000436978 ANXA8L1Q5VT79 327 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 ZFYVE1Q9HBF4 777 aa15.96■□□□□ 0.15
PTPN13-204ENST00000436978 GRIA4P48058 902 aa15.96■□□□□ 0.14
PTPN13-204ENST00000436978 CBX2Q14781 532 aaPredicted RBP15.96■□□□□ 0.14
PTPN13-204ENST00000436978 ABHD15Q6UXT9 468 aa15.96■□□□□ 0.14
PTPN13-204ENST00000436978 SNX32Q86XE0 403 aa15.96■□□□□ 0.14
PTPN13-204ENST00000436978 PIWIL2Q8TC59 973 aaKnown RBP15.96■□□□□ 0.14
PTPN13-204ENST00000436978 SHC3Q92529 594 aa15.96■□□□□ 0.14
PTPN13-204ENST00000436978 RIBC2Q9H4K1 309 aa15.96■□□□□ 0.14
PTPN13-204ENST00000436978 NUDT5Q9UKK9 219 aa15.96■□□□□ 0.14
PTPN13-204ENST00000436978 MT-CO1P00395 513 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 FMO1Q01740 532 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 OTUD3Q5T2D3 398 aaPredicted RBP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 MYO19Q96H55 970 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 TEX28O15482 410 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 HLA-DQA2P01906 255 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 SNRPB2P08579 225 aaKnown RBP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 SLC24A5Q71RS6 500 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 KLHL1Q9NR64 748 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 NEDD8-MDP1E9PL57 170 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 MED26O95402 600 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 ARF4P18085 180 aaPredicted RBP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 MOXD2PA6NHM9 499 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 PHGDHO43175 533 aaKnown RBP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 SMNDC1O75940 238 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 LRRC55Q6ZSA7 311 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 KRT77Q7Z794 578 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 FAM20CQ8IXL6 584 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 TRAPPC9Q96Q05 1148 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 TAS2R14Q9NYV8 317 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 H3BQF6 201 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 WARSP23381 471 aaKnown RBP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 GPAT3Q53EU6 434 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 LPCAT2Q7L5N7 544 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 NET1Q7Z628 596 aaPredicted RBP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 ZNF398Q8TD17 642 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 HSD17B14Q9BPX1 270 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 SYN3O14994 580 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 PAGE1O75459 146 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 WBP4O75554 376 aaKnown RBP15.95■□□□□ 0.14
PTPN13-204ENST00000436978 CCNA2P20248 432 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 ITCHQ96J02 903 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 ROGDIQ9GZN7 287 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 CYLDQ9NQC7 956 aa15.95■□□□□ 0.14
PTPN13-204ENST00000436978 ECDO95905 644 aaPredicted RBP15.94■□□□□ 0.14
PTPN13-204ENST00000436978 PLEKHA7Q6IQ23 1121 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 ZNF607Q96SK3 696 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 HNMTP50135 292 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 DRG2P55039 364 aaKnown RBP15.94■□□□□ 0.14
PTPN13-204ENST00000436978 DNAJC14Q6Y2X3 702 aaPredicted RBP15.94■□□□□ 0.14
PTPN13-204ENST00000436978 ART4Q93070 314 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 SMAD3P84022 425 aaKnown RBP15.94■□□□□ 0.14
PTPN13-204ENST00000436978 TNK2Q07912 1038 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 PLPP4Q5VZY2 271 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 UNC5AQ6ZN44 842 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 CLN6Q9NWW5 311 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 NBNO60934 754 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 ENPEPQ07075 957 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 ZNF618Q5T7W0 954 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 PIWIL4Q7Z3Z4 852 aaKnown RBP15.94■□□□□ 0.14
PTPN13-204ENST00000436978 HIC2Q96JB3 615 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 CDRT15Q96T59 188 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 GPR20Q99678 358 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 MRPL45Q9BRJ2 306 aaKnown RBP15.94■□□□□ 0.14
PTPN13-204ENST00000436978 AASDHPPTQ9NRN7 309 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 VAV3Q9UKW4 847 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 GSTK1Q9Y2Q3 226 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 ATG13O75143 517 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 OR6B1O95007 311 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 FAM153BP0C7A2 387 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 MAPKAPK3Q16644 382 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 NDUFAF6Q330K2 333 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 FAM153CQ494X1 144 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 COL26A1Q96A83 441 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 SLC12A4Q9UP95 1085 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 CLDN5O00501 218 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 SPATA31C1P0DKV0 1188 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 NOMO3P69849 1222 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 ELP6Q0PNE2 266 aa15.94■□□□□ 0.14
PTPN13-204ENST00000436978 DGUOKQ16854 277 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms