RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 STX7O15400 261 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PAPSS1O43252 624 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 NDST3O95803 873 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CDKL1Q00532 357 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LRP8Q14114 963 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TRIM67Q6ZTA4 783 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 BRSK1Q8TDC3 778 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TEKT5Q96M29 485 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CCDC115Q96NT0 180 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GPR22Q99680 433 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TBL1YQ9BQ87 522 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SEMA4AQ9H3S1 761 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TFB2MQ9H5Q4 396 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SAMD4AQ9UPU9 718 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ANKRD36A6QL64 1941 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SGTAO43765 313 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FESP07332 822 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GJC1P36383 396 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 EEFSECP57772 596 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ARHGAP19Q14CB8 494 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FAM98BQ52LJ0 330 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FASTKD1Q53R41 847 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GDPGP1Q6ZNW5 385 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CLYBLQ8N0X4 340 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ASB13Q8WXK3 278 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DGCR14Q96DF8 476 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FAM212AQ96EL1 285 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF641Q96N77 438 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SLC2A13Q96QE2 648 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ING2Q9H160 280 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ATP13A3Q9H7F0 1226 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LCHNA4D1U4 455 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 WASH4PA8MWX3 477 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 M0QZQ0 153 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FCHO1O14526 889 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TBC1D4O60343 1298 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ADH1AP07327 375 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 BPGMP07738 259 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PABPC1P11940 636 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 NCF1P14598 390 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ARF4P18085 180 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 VPS41P49754 854 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CHRNB3Q05901 458 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PRAMEF8Q5VWM4 474 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PRAMEF7Q5VXH5 474 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 XKRXQ6PP77 449 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TRMT11Q7Z4G4 463 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ISG20Q96AZ6 181 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ZNF669Q96BR6 464 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 NPY6RQ99463 290 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ADAMTS10Q9H324 1103 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PARVBQ9HBI1 364 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 USP29Q9HBJ7 922 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DZANK1Q9NVP4 752 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CPNE7Q9UBL6 633 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TRMT6Q9UJA5 497 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 RUVBL1Q9Y265 456 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SNX5Q9Y5X3 404 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 UBXN8O00124 270 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 NDUFS3O75489 264 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 URODP06132 367 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CDH4P55283 916 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HERVK_113P63132 956 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TAB1Q15750 504 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PPP4R4Q6NUP7 873 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CAMK1GQ96NX5 476 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PRMT1Q99873 361 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ERVK-6Q9BXR3 956 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ETNK2Q9NVF9 386 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 EURLQ9NYK6 297 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SMIM28A0A1B0GU29 152 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DPM1O60762 260 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 SRGAP2O75044 1071 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 RECQL4O94761 1208 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 C4BPAP04003 597 aaKnown RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 KELP23276 732 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 IL12AP29459 219 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HLA-FP30511 346 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 BIKQ13323 160 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FAM45BPQ6NSW5 357 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DPP10Q8N608 796 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 FAM45AQ8TCE6 357 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 KREMEN1Q96MU8 473 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PACSIN1Q9BY11 444 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TPRKBQ9Y3C4 175 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 HEBP2Q9Y5Z4 205 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 DNAJC25-GNG10A0A024R161 153 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 STX11O75558 287 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 KRT36O76013 467 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 GSRP00390 522 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 RETP07949 1114 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 LBPP18428 481 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 PSEN2P49810 448 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TPD52P55327 224 aaPredicted RBP3.79□□□□□ -1.8
SHPRH-205ENST00000433355 CACNG1Q06432 222 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 USP41Q3LFD5 358 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 ATP6AP1LQ52LC2 224 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 TTMPQ5BVD1 217 aa3.79□□□□□ -1.8
SHPRH-205ENST00000433355 EARS2Q5JPH6 523 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms