RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 LAYNQ6UX15 382 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 ERN2Q76MJ5 926 aaKnown RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 ADAT2Q7Z6V5 191 aaKnown RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 CCDC50Q8IVM0 306 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 PGBD5Q8N414 524 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 MEIOBQ8N635 442 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 PQLC3Q8N755 202 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 CEP76Q8TAP6 659 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 FAM71BQ8TC56 605 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 KIAA1524Q8TCG1 905 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 PDCD6IPQ8WUM4 868 aaKnown RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 NSMCE1Q8WV22 266 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 CASKIN2Q8WXE0 1202 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 DNASE2BQ8WZ79 361 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 ISG20Q96AZ6 181 aaKnown RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 PPP1R16AQ96I34 528 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 FEM1CQ96JP0 617 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 SERAC1Q96JX3 654 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 GDAP1L1Q96MZ0 367 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 SLC6A18Q96N87 628 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 WRAP53Q9BUR4 548 aaKnown RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 EDEM2Q9BV94 578 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 HEMGNQ9BXL5 484 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 GRPEL1Q9HAV7 217 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 IL21RQ9HBE5 538 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 TM9SF3Q9HD45 589 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 FZD3Q9NPG1 666 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 DDX56Q9NY93 547 aaKnown RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 SAE1Q9UBE0 346 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 TRIM10Q9UDY6 481 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 GGT7Q9UJ14 662 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 ITM2BQ9Y287 266 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 CA5BQ9Y2D0 317 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDHGC4Q9Y5F7 938 aa5.84□□□□□ -1.47
HMGB3P24-201ENST00000433260 TP53BP1Q12888 1972 aaPredicted RBP5.84□□□□□ -1.48
HMGB3P24-201ENST00000433260 IGLON5A6NGN9 336 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 C3orf70A6NLC5 250 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 MEN1O00255 615 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CDX4O14627 284 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 APOL1O14791 398 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 MFSD11O43934 449 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CST8O60676 142 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 NEBLO76041 1014 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZRANB2O95218 330 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 JCHAINP01591 159 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 WNT1P04628 370 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SYPP08247 313 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 BMP2P12643 396 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 PRLRP16471 622 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CCNCP24863 283 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ITGB7P26010 798 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CD38P28907 300 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 DPP6P42658 865 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 MMP13P45452 471 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 MARCKSL1P49006 195 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SMCPP49901 116 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 RENBPP51606 427 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CCR5P51681 352 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 VAV2P52735 878 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 C21orf59P57076 290 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 BNC1Q01954 994 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 BCL2L1Q07817 233 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ADCY2Q08462 1091 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 NSUN2Q08J23 767 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 AP1B1Q10567 949 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 KIF5AQ12840 1032 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZNF235Q14590 738 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 PAFAH1B3Q15102 231 aaKnown RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 PTPRRQ15256 657 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 TEAD4Q15561 434 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 IFI16Q16666 785 aaKnown RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SWI5Q1ZZU3 235 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 KIF19Q2TAC6 998 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 HLA-BQ31612 363 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CFAP58Q5T655 872 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 PEAR1Q5VY43 1037 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 MFSD7Q6UXD7 560 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SPOCD1Q6ZMY3 1216 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 PARS2Q7L3T8 475 aaKnown RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 RCOR2Q8IZ40 523 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 BBS5Q8N3I7 341 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 MINDY1Q8N5J2 469 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ATPAF2Q8N5M1 289 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 C1orf216Q8TAB5 229 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 KRT35Q92764 455 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 VOPP1Q96AW1 172 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 LRIG1Q96JA1 1093 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 NSMCE3Q96MG7 304 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZNF830Q96NB3 372 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 LGMNQ99538 433 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ORAI3Q9BRQ5 295 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 ZNF670Q9BS34 389 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 HDAC8Q9BY41 377 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SLC17A9Q9BYT1 436 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CEP41Q9BYV8 373 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 CPEB1Q9BZB8 566 aaKnown RBP5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 SUV39H2Q9H5I1 410 aa5.83□□□□□ -1.48
HMGB3P24-201ENST00000433260 GAREM1Q9H706 876 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms