RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 MOB3CQ70IA8 216 aa3.46□□□□□ -1.85
CLK1-204ENST00000432425 SHFQ7M4L6 423 aa3.46□□□□□ -1.85
CLK1-204ENST00000432425 ZC3HAV1LQ96H79 300 aaKnown RBP3.46□□□□□ -1.85
CLK1-204ENST00000432425 REEP2Q9BRK0 252 aa3.46□□□□□ -1.85
CLK1-204ENST00000432425 ISCA1Q9BUE6 129 aa3.46□□□□□ -1.85
CLK1-204ENST00000432425 CYSLTR2Q9NS75 346 aa3.46□□□□□ -1.85
CLK1-204ENST00000432425 WDR81Q562E7 1941 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 ADGRF5Q8IZF2 1346 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 J3KR12 359 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 BUB3O43684 328 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 PEX14O75381 377 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 SLC2A4P14672 509 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 PTPN2P17706 415 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 SRD5A1P18405 259 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 FAM76BQ5HYJ3 339 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 C17orf99Q6UX52 265 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 ADGRG6Q86SQ4 1221 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 TBC1D26Q86UD7 250 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 PGBD5Q8N414 524 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 ZNF114Q8NC26 417 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 BICD1Q96G01 975 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 ZSCAN31Q96LW9 406 aaPredicted RBP3.46□□□□□ -1.86
CLK1-204ENST00000432425 CLSTN3Q9BQT9 956 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 HERPUD2Q9BSE4 406 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 GAREM1Q9H706 876 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 PCDHGB3Q9Y5G1 929 aa3.46□□□□□ -1.86
CLK1-204ENST00000432425 hDV102S1A0JD36 115 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 PABPN1LA6NDY0 278 aaKnown RBP3.45□□□□□ -1.86
CLK1-204ENST00000432425 CBY3A6NI87 242 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 CLGNO14967 610 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 KRT36O76013 467 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 DDNO94850 711 aaPredicted RBP3.45□□□□□ -1.86
CLK1-204ENST00000432425 NDUFB4O95168 129 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 IGHV4-30-4P0DP06 118 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 SSTR2P30874 369 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 RYKP34925 604 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 PIGAP37287 484 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 HALP42357 657 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 GPD2P43304 727 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 DLG1Q12959 904 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 ESCO2Q56NI9 601 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 MAP3K21Q5TCX8 1036 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 LDHAL6AQ6ZMR3 332 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 FAM160B2Q86V87 743 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 PARP16Q8N5Y8 322 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 GJC3Q8NFK1 279 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 IL17FQ96PD4 163 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 EYA3Q99504 573 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 BABAM1Q9NWV8 329 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 IL1RAPL1Q9NZN1 696 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 TAF1P21675 1872 aa3.45□□□□□ -1.86
CLK1-204ENST00000432425 MAGEA13PA6NCF6 341 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 HSPB2A8KAH6 182 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 KLRF2D3W0D1 207 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 HSPA12AO43301 675 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 GAGE7O76087 117 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 AFPP02771 609 aaKnown RBP3.44□□□□□ -1.86
CLK1-204ENST00000432425 F7P08709 466 aaPredicted RBP3.44□□□□□ -1.86
CLK1-204ENST00000432425 GAGE12FP0CL80 117 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 GAGE12GP0CL81 117 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 GAGE12IP0CL82 117 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 NR1H2P55055 460 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 ECT2LQ008S8 904 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 GAGE1Q13065 139 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 GAGE4Q13068 117 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 PPFIA1Q13136 1202 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 ITGADQ13349 1161 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 HSPB2Q16082 182 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 WDR45BQ5MNZ6 344 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 FAM69BQ5VUD6 431 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 ATG16L1Q676U5 607 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 EXOC3L1Q86VI1 746 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 ZC3HC1Q86WB0 502 aaKnown RBP3.44□□□□□ -1.86
CLK1-204ENST00000432425 KIAA2013Q8IYS2 634 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 RFLNBQ8N5W9 214 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 LSM14AQ8ND56 463 aaKnown RBP3.44□□□□□ -1.86
CLK1-204ENST00000432425 TNIP2Q8NFZ5 429 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 RUFY2Q8WXA3 655 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 SCMH1Q96GD3 660 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 INPP4AQ96PE3 977 aaPredicted RBP3.44□□□□□ -1.86
CLK1-204ENST00000432425 ZNF385AQ96PM9 386 aaKnown RBP3.44□□□□□ -1.86
CLK1-204ENST00000432425 PEMTQ9UBM1 199 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 SLCO3A1Q9UIG8 710 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 CARD8Q9Y2G2 431 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 A3GALT2U3KPV4 340 aa3.44□□□□□ -1.86
CLK1-204ENST00000432425 LINC01565O15544 149 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 CD58P19256 250 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 CHATP28329 748 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 CXCR3P49682 368 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 DLX5P56178 289 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 UBE3AQ05086 875 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 VEPH1Q14D04 833 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 SOWAHAQ2M3V2 549 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 SERTAD4-AS1Q5TG53 156 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 BBS12Q6ZW61 710 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 ZNF329Q86UD4 541 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 ANKRD18AQ8IVF6 992 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 SIN3AQ96ST3 1273 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 NUF2Q9BZD4 464 aa3.43□□□□□ -1.86
CLK1-204ENST00000432425 PPCSQ9HAB8 311 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms