RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ANKRD27Q96NW4 1050 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 TRIB3Q96RU7 358 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 MRPL57Q9BQC6 102 aaKnown RBP14.06□□□□□ -0.16
HOXC4-202ENST00000430889 ILKAPQ9H0C8 392 aaPredicted RBP14.06□□□□□ -0.16
HOXC4-202ENST00000430889 MRPL46Q9H2W6 279 aaKnown RBP14.06□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF385DQ9H6B1 395 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 CWH43Q9H720 699 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 DNMT3LQ9UJW3 386 aa14.06□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF840PA6NDX5 716 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 F8W8V4 182 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 NPHS1O60500 1241 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 DIAPH2O60879 1101 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 S1PR4O95977 384 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 SAT1P21673 171 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 PSMA3P25788 255 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 CCR10P46092 362 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 GLRBP48167 497 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 NAA25Q14CX7 972 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 ARL13AQ5H913 290 aaPredicted RBP14.05□□□□□ -0.16
HOXC4-202ENST00000430889 TMC7Q7Z402 723 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 LMNTD2Q8IXW0 634 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 ULK2Q8IYT8 1036 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 PHTF2Q8N3S3 785 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 TXNDC5Q8NBS9 432 aaKnown RBP14.05□□□□□ -0.16
HOXC4-202ENST00000430889 PDCD6IPQ8WUM4 868 aaKnown RBP14.05□□□□□ -0.16
HOXC4-202ENST00000430889 HEXDCQ8WVB3 486 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 UBXN10Q96LJ8 280 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 NSMCE3Q96MG7 304 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 PRICKLE1Q96MT3 831 aaPredicted RBP14.05□□□□□ -0.16
HOXC4-202ENST00000430889 TSNARE1Q96NA8 513 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF570Q96NI8 536 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 SEMA3CQ99985 751 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 MGME1Q9BQP7 344 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 POLR1EQ9GZS1 481 aaKnown RBP14.05□□□□□ -0.16
HOXC4-202ENST00000430889 MAGEH1Q9H213 219 aa14.05□□□□□ -0.16
HOXC4-202ENST00000430889 PAK6Q9NQU5 681 aaPredicted RBP14.05□□□□□ -0.16
HOXC4-202ENST00000430889 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.05□□□□□ -0.16
HOXC4-202ENST00000430889 A0A088AWK7 358 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 F5H5T6 163 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 HDAC3O15379 428 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 FKTNO75072 461 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 GJB5O95377 273 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 PIGNO95427 931 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 FGF1P05230 155 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 HLA-DPA1P20036 260 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 ETFBP38117 255 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 RPL14P50914 215 aaKnown RBP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 NAGLUP54802 743 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 PFKPQ01813 784 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 ITKQ08881 620 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 PRKAA1Q13131 559 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 NET1Q7Z628 596 aaPredicted RBP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 SCUBE1Q8IWY4 988 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 GPATCH11Q8N954 259 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 KDM1BQ8NB78 822 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 PDZD8Q8NEN9 1154 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 GPR150Q8NGU9 434 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 VWCEQ96DN2 955 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 SCLYQ96I15 445 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 SCYL1Q96KG9 808 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 CNDP1Q96KN2 507 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 OR52B2Q96RD2 323 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 UNC93B1Q9H1C4 597 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 MARCH4Q9P2E8 410 aaPredicted RBP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 HSFX1Q9UBD0 423 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 ZDHHC2Q9UIJ5 367 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 LRRC42Q9Y546 428 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 KCTD3Q9Y597 815 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 A0A0D9SEW6 157 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 COCHO43405 550 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 KRT36O76013 467 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 PSMG1O95456 288 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 SEC24AO95486 1093 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 KLKB1P03952 638 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 CR2P20023 1033 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 ATP5C1P36542 298 aaKnown RBP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 SERPINB5P36952 375 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 TUFMP49411 452 aaKnown RBP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 CDH4P55283 916 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 TIAL1Q01085 375 aaKnown RBP eCLIP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 GNA12Q03113 381 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 USP41Q3LFD5 358 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 CMPK2Q5EBM0 449 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 HECTD2Q5U5R9 776 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 PGM2L1Q6PCE3 622 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 CFAP52Q8N1V2 620 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 ZNF296Q8WUU4 475 aaPredicted RBP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 HDAC10Q969S8 669 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 PLD4Q96BZ4 506 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 MYRFLQ96LU7 910 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 NDNQ99608 321 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 CLSTN3Q9BQT9 956 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 AFF4Q9UHB7 1163 aaKnown RBP14.04□□□□□ -0.16
HOXC4-202ENST00000430889 SLC7A8Q9UHI5 535 aa14.04□□□□□ -0.16
HOXC4-202ENST00000430889 ABLIM3O94929 683 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 SNUPNO95149 360 aaKnown RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 RPL17P18621 184 aaKnown RBP14.03□□□□□ -0.16
HOXC4-202ENST00000430889 TFEBP19484 476 aa14.03□□□□□ -0.16
HOXC4-202ENST00000430889 ATP5F1P24539 256 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms