RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 GALNT15Q8N3T1 639 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 NELL1Q92832 810 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 RMDN1Q96DB5 314 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 IFT43Q96FT9 208 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 CNDP1Q96KN2 507 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 PAAF1Q9BRP4 392 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 TINF2Q9BSI4 451 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 VTA1Q9NP79 307 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 FBXO5Q9UKT4 447 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 MRASO14807 208 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 CASQ2O14958 399 aaPredicted RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 AURKAO14965 403 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 TIPRLO75663 272 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 B3GALNT1O75752 331 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 CNMDO75829 334 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 GRIA3P42263 894 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 KPNA2P52292 529 aaKnown RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 PSME3P61289 254 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 NIPAL4Q0D2K0 466 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 CNSTQ6PJW8 725 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 TAC4Q86UU9 113 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 SPATA2LQ8IUW3 424 aaPredicted RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 B4GALNT2Q8NHY0 566 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 ACTRT2Q8TDY3 377 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 MYLPFQ96A32 169 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 PFDN4Q9NQP4 134 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 DNAJC28Q9NX36 388 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 FAM50BQ9Y247 325 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 BTRCQ9Y297 605 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 ANGPT2O15123 496 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 BNIP3LO60238 219 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 SRP72O76094 671 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 BAIAP3O94812 1187 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PRKCGP05129 697 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 CD86P42081 329 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 RAB10P61026 200 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 EFEMP1Q12805 493 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PPP1R3AQ16821 1122 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 RBM20Q5T481 1227 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 AAGABQ6PD74 315 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 CXCL17Q6UXB2 119 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 ZBTB49Q6ZSB9 765 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PDSS2Q86YH6 399 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 EFHBQ8N7U6 833 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 GATA6Q92908 595 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 TRAPPC9Q96Q05 1148 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 ABHD16BQ9H3Z7 469 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 NOL11Q9H8H0 719 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 LIN28AQ9H9Z2 209 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 FBRSL1Q9HCM7 1045 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 COMMD8Q9NX08 183 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 FLRT1Q9NZU1 646 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PSMD13Q9UNM6 376 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 AAR2Q9Y312 384 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 PCDHGA4Q9Y5G9 962 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 SUPT3HB4E1H0 165 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PSMD12O00232 456 aaPredicted RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 MTSS1O43312 755 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 HNRNPRO43390 633 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 DLX3O60479 287 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 ANXA9O76027 345 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 INMTO95050 263 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 FAM58BPP0C7Q3 252 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 CKMT2P17540 419 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 CPOXP36551 454 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 NPY2RP49146 381 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 CAPRIN1Q14444 709 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 PTPRCAPQ14761 206 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 FOXB2Q5VYV0 432 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 TAPT1Q6NXT6 567 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 LINC00523Q86TU6 105 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 JAZF1Q86VZ6 243 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 ARRDC4Q8NCT1 418 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 HEXDCQ8WVB3 486 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 LRTOMTQ8WZ04 291 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 ESAMQ96AP7 390 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 RTP4Q96DX8 246 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 EXOC2Q96KP1 924 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 HBEGFQ99075 208 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 SEPHS2Q99611 448 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PKP2Q99959 881 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 RTKNQ9BST9 563 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 MLPHQ9BV36 600 aaPredicted RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 SPATA16Q9BXB7 569 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 MRPL46Q9H2W6 279 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 RHOJQ9H4E5 214 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 IPO11Q9UI26 975 aaKnown RBP8.12□□□□□ -1.11
HPS4-205ENST00000429411 C17orf102A2RUQ5 167 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 MYL4P12829 197 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 CPB1P15086 417 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 YWHAQP27348 245 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 PCSK1P29120 753 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 LRPAP1P30533 357 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 SLC1A2P43004 574 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 SLC7A2P52569 658 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 DAOAP59103 153 aa8.12□□□□□ -1.11
HPS4-205ENST00000429411 EPGNQ6UW88 154 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms