RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TRIM67Q6ZTA4 783 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 MMAAQ8IVH4 418 aaKnown RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 KLHDC8BQ8IXV7 354 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PDIK1LQ8N165 341 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SYNPOQ8N3V7 929 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZCCHC9Q8N567 271 aaKnown RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PJA1Q8NG27 643 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 OR52K1Q8NGK4 314 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 OR2T3Q8NH03 318 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 FBXO25Q8TCJ0 367 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PTPRN2Q92932 1015 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 ART4Q93070 314 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 TADA1Q96BN2 335 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 RMDN1Q96DB5 314 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PPP1R16AQ96I34 528 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 LRIG1Q96JA1 1093 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 MRGPRX2Q96LB1 330 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 NSMCE3Q96MG7 304 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PWWP2AQ96N64 755 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZNF641Q96N77 438 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 KLHL32Q96NJ5 620 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 SERPINB12Q96P63 405 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 NELL2Q99435 816 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 GABRG3Q99928 467 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 PARD6BQ9BYG5 372 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 FRMD8Q9BZ67 464 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 FAM129AQ9BZQ8 928 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 NEUROG2Q9H2A3 272 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 FBRSQ9HAH7 460 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZDHHC18Q9NUE0 388 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 MMP17Q9ULZ9 603 aa7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 MTF2Q9Y483 593 aaPredicted RBP7.98□□□□□ -1.13
HMGA1P4-201ENST00000428643 UQCRHLA0A096LP55 91 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 A0A1W2PQF6 199 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 BHMG1C9JSJ3 638 aaPredicted RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 AP3B1O00203 1094 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CTIFO43310 598 aaKnown RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 HTRA2O43464 458 aaPredicted RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ATG13O75143 517 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 AVILO75366 819 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 EPOP01588 193 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 TUBBP07437 444 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 UQCRHP07919 91 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 PDHA1P08559 390 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ATXN1LP0C7T5 689 aaKnown RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CTPS1P17812 591 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 COL9A1P20849 921 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ITGB7P26010 798 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 TNFRSF8P28908 595 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ECHS1P30084 290 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ADRA1AP35348 466 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 GRIA4P48058 902 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 RPL26P61254 145 aaKnown RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CDH17Q12864 832 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 SLC1A5Q15758 541 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CST6Q15828 149 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 TTC31Q49AM3 519 aaPredicted RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZNF805Q5CZA5 627 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 LRRC73Q5JTD7 316 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 FAM46CQ5VWP2 391 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 DENND2CQ68D51 928 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 WDR93Q6P2C0 686 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CASC4Q6P4E1 433 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 BRAT1Q6PJG6 821 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 KIAA1324Q6UXG2 1013 aaKnown RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CEP128Q6ZU80 1094 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 USP45Q70EL2 814 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CENPUQ71F23 418 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZNF534Q76KX8 674 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 PARS2Q7L3T8 475 aaKnown RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZSWIM9Q86XI8 627 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ZNF687Q8N1G0 1237 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 MCUQ8NE86 351 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 PIP4K2CQ8TBX8 421 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 GANCQ8TET4 914 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 EDAQ92838 391 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 TRIB3Q96RU7 358 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CPEB1Q9BZB8 566 aaKnown RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 RSPH9Q9H1X1 276 aaPredicted RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 SUV39H2Q9H5I1 410 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 CASS4Q9NQ75 786 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 BFARQ9NZS9 450 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 SAMD15Q9P1V8 674 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 BCCIPQ9P287 314 aaKnown RBP eCLIP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 PPM1HQ9ULR3 514 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 RPL26L1Q9UNX3 145 aaKnown RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 ARIH1Q9Y4X5 557 aaPredicted RBP7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 MAD1L1Q9Y6D9 718 aa7.97□□□□□ -1.13
HMGA1P4-201ENST00000428643 LOC285095A0A1B0GVY8 99 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 A0A1W2PQ67 120 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 CAPN8A6NHC0 703 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 C16orf96A6NNT2 1141 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 UPK3BL1B0FP48 263 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 UPK3BL2E5RIL1 263 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PLK4O00444 970 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 TRAFD1O14545 582 aaPredicted RBP7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 MID1O15344 667 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 TP73O15350 636 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 PPFIA2O75334 1257 aa7.96□□□□□ -1.14
HMGA1P4-201ENST00000428643 BANF1O75531 89 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms