RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 UGP2Q16851 508 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 HGSNATQ68CP4 663 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 ARHGAP36Q6ZRI8 547 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 ZSWIM9Q86XI8 627 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 TSEN2Q8NCE0 465 aaKnown RBP27.5■■□□□ 1.99
LMO1-202ENST00000428101 ZNF641Q96N77 438 aaPredicted RBP27.5■■□□□ 1.99
LMO1-202ENST00000428101 CBX8Q9HC52 389 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 PCDH12Q9NPG4 1184 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 SCUBE2Q9NQ36 999 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 CWC15Q9P013 229 aaKnown RBP27.5■■□□□ 1.99
LMO1-202ENST00000428101 MYO1AQ9UBC5 1043 aa27.5■■□□□ 1.99
LMO1-202ENST00000428101 AQP9O43315 295 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 PALMO75781 387 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 MYBL1P10243 752 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 PBX1P40424 430 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 CSNK1DP48730 415 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 HCAR3P49019 387 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 YPEL5P62699 121 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 DPYSQ14117 519 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 LUZP1Q86V48 1076 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 CAMK1DQ8IU85 385 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 TRIM11Q96F44 468 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 C1QTNF7Q9BXJ2 289 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 TCEAL2Q9H3H9 227 aaPredicted RBP27.49■■□□□ 1.99
LMO1-202ENST00000428101 MRPL47Q9HD33 250 aaKnown RBP27.49■■□□□ 1.99
LMO1-202ENST00000428101 COQ6Q9Y2Z9 468 aa27.49■■□□□ 1.99
LMO1-202ENST00000428101 LOC400499M0QZD8 3231 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 A0A087WV48 116 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 SYCE3A1L190 88 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 MT-CO3P00414 261 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 XPAP23025 273 aaPredicted RBP27.48■■□□□ 1.99
LMO1-202ENST00000428101 IL1R2P27930 398 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 PCK1P35558 622 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 FANCCQ00597 558 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 ELP6Q0PNE2 266 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 PTK2BQ14289 1009 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 SRLQ86TD4 932 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 TP53INP2Q8IXH6 220 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 RBFAQ8N0V3 343 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 LMX1AQ8TE12 382 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 TUBGCP5Q96RT8 1024 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 USP29Q9HBJ7 922 aa27.48■■□□□ 1.99
LMO1-202ENST00000428101 DFFAO00273 331 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 RIOK3O14730 519 aaKnown RBP27.47■■□□□ 1.99
LMO1-202ENST00000428101 OPA1O60313 960 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 GP1BAP07359 652 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 TCF4P15884 667 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 ZNF135P52742 658 aaPredicted RBP27.47■■□□□ 1.99
LMO1-202ENST00000428101 THOP1P52888 689 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 IRF4Q15306 451 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 CDCP2Q5VXM1 449 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 ZCCHC8Q6NZY4 707 aaKnown RBP27.47■■□□□ 1.99
LMO1-202ENST00000428101 BRAT1Q6PJG6 821 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 AK5Q9Y6K8 562 aa27.47■■□□□ 1.99
LMO1-202ENST00000428101 RP1P56715 2156 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 A0A1W2PQJ5 194 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 TOR1BO14657 336 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 GCATO75600 419 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 C6P13671 934 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 EIF4A3P38919 411 aaKnown RBP27.46■■□□□ 1.99
LMO1-202ENST00000428101 DUSP3P51452 185 aaPredicted RBP27.46■■□□□ 1.99
LMO1-202ENST00000428101 SEMG2Q02383 582 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 ACAP1Q15027 740 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 WSCD2Q2TBF2 565 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 DEFB133Q30KQ1 61 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 PHACTR4Q8IZ21 702 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 BTN2A2Q8WVV5 523 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 SP110Q9HB58 689 aa27.46■■□□□ 1.99
LMO1-202ENST00000428101 TPP1O14773 563 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 MUSKO15146 869 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 TLX3O43711 291 aaPredicted RBP27.45■■□□□ 1.98
LMO1-202ENST00000428101 PRKCGP05129 697 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 HOXB3P14651 431 aaPredicted RBP27.45■■□□□ 1.98
LMO1-202ENST00000428101 MMP12P39900 470 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 IL10RBQ08334 325 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 NSUN2Q08J23 767 aaKnown RBP eCLIP27.45■■□□□ 1.98
LMO1-202ENST00000428101 RFTN1Q14699 578 aaPredicted RBP27.45■■□□□ 1.98
LMO1-202ENST00000428101 LRRC14Q15048 493 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 DPYSL2Q16555 572 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 SMTNL2Q2TAL5 461 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 MACC1Q6ZN28 852 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 SYN2Q92777 582 aaPredicted RBP27.45■■□□□ 1.98
LMO1-202ENST00000428101 NSMCE3Q96MG7 304 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 CINPQ9BW66 212 aaPredicted RBP27.45■■□□□ 1.98
LMO1-202ENST00000428101 ATP13A3Q9H7F0 1226 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 ZWILCHQ9H900 591 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 SPASTQ9UBP0 616 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 APOBEC3BQ9UH17 382 aaKnown RBP27.45■■□□□ 1.98
LMO1-202ENST00000428101 SALL4Q9UJQ4 1053 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 ATP8A1Q9Y2Q0 1164 aa27.45■■□□□ 1.98
LMO1-202ENST00000428101 BZW2Q9Y6E2 419 aaKnown RBP27.45■■□□□ 1.98
LMO1-202ENST00000428101 LIG3P49916 1009 aa27.44■■□□□ 1.98
LMO1-202ENST00000428101 UBASH3AP57075 661 aa27.44■■□□□ 1.98
LMO1-202ENST00000428101 C1orf61Q13536 156 aa27.44■■□□□ 1.98
LMO1-202ENST00000428101 TDRD12Q587J7 1177 aaKnown RBP27.44■■□□□ 1.98
LMO1-202ENST00000428101 PRRT3Q5FWE3 981 aa27.44■■□□□ 1.98
LMO1-202ENST00000428101 CFAP58Q5T655 872 aa27.44■■□□□ 1.98
LMO1-202ENST00000428101 ERAP2Q6P179 960 aa27.44■■□□□ 1.98
LMO1-202ENST00000428101 POLNQ7Z5Q5 900 aa27.44■■□□□ 1.98
LMO1-202ENST00000428101 PDZD3Q86UT5 571 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms