RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 RUNDC3BQ96NL0 473 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 TUBB2BQ9BVA1 445 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 ADGRE3Q9BY15 652 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 VPS45Q9NRW7 570 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 UBP1Q9NZI7 540 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 PAK5Q9P286 719 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 AAR2Q9Y312 384 aaKnown RBP15.28■□□□□ 0.04
VARS2-203ENST00000428017 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
VARS2-203ENST00000428017 IGHV1OR15-9A0A0B4J2B8 117 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 TSPAN11A1L157 253 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 FAM47DPA6NHR8 397 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 UPK3BL1B0FP48 263 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 UPK3BL2E5RIL1 263 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 TRAFD1O14545 582 aaPredicted RBP15.27■□□□□ 0.04
VARS2-203ENST00000428017 HTRA2O43464 458 aaPredicted RBP15.27■□□□□ 0.04
VARS2-203ENST00000428017 PGLSO95336 258 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 ECEL1O95672 775 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 SEMA4FO95754 770 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 PSMB4P28070 264 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 DRD3P35462 400 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 RPL6Q02878 288 aaKnown RBP15.27■□□□□ 0.04
VARS2-203ENST00000428017 TRAF2Q12933 501 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 MPP3Q13368 585 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 UGP2Q16851 508 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 WHAMMP3Q1A5X7 153 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.04
VARS2-203ENST00000428017 PIP5KL1Q5T9C9 394 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 AGBL4Q5VU57 503 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 PRPF39Q86UA1 669 aaKnown RBP15.27■□□□□ 0.04
VARS2-203ENST00000428017 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 ZBTB44Q8NCP5 570 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 IPMKQ8NFU5 416 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 FSD1LQ9BXM9 530 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 TDRD1Q9BXT4 1180 aaKnown RBP15.27■□□□□ 0.04
VARS2-203ENST00000428017 PCDH9Q9HC56 1237 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 CD93Q9NPY3 652 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 PHTF1Q9UMS5 762 aa15.27■□□□□ 0.04
VARS2-203ENST00000428017 ARIH1Q9Y4X5 557 aaPredicted RBP15.27■□□□□ 0.04
VARS2-203ENST00000428017 CKAP5Q14008 2032 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3KA0A087X1G2 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3FA6NER0 549 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 PRR23AA6NEV1 266 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 ESPNB1AK53 854 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 E7EVH7 732 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 PDE2AO00408 941 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 PCDH8O95206 1070 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 MT-CYBP00156 380 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 MMP2P08253 660 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TIMP2P16035 220 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 ACSL1P33121 698 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 LMAN1P49257 510 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 ADPRHP54922 357 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 RPL26P61254 145 aaKnown RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 FAM193AP78312 1265 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 CDK18Q07002 472 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 ELP6Q0PNE2 266 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 SIM2Q14190 667 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 PPP1R7Q15435 360 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 ELF2Q15723 593 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3GQ6DHY5 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TTC27Q6P3X3 843 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 USP45Q70EL2 814 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 KDELC2Q7Z4H8 507 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 TAB3Q8N5C8 712 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 LPCAT1Q8NF37 534 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 PRSS33Q8NF86 280 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 OR2T34Q8NGX1 318 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 ATOH1Q92858 354 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 RMDN1Q96DB5 314 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 ECHDC3Q96DC8 303 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 GPR174Q9BXC1 333 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 DDX47Q9H0S4 455 aaKnown RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 KDM4CQ9H3R0 1056 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 WSB2Q9NYS7 404 aaPredicted RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 RPL26L1Q9UNX3 145 aaKnown RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 CHKBQ9Y259 395 aa15.26■□□□□ 0.03
VARS2-203ENST00000428017 MYO18AQ92614 2054 aaKnown RBP15.26■□□□□ 0.03
VARS2-203ENST00000428017 KMT2EQ8IZD2 1858 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 PSMD3O43242 534 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 HRO43593 1189 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 PLRG1O43660 514 aaKnown RBP15.25■□□□□ 0.03
VARS2-203ENST00000428017 KRT14P02533 472 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 ETS1P14921 441 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 FDFT1P37268 417 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 WNT3AP56704 352 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 SRSF5Q13243 272 aaKnown RBP15.25■□□□□ 0.03
VARS2-203ENST00000428017 LRRC73Q5JTD7 316 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 PRR23BQ6ZRT6 265 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 LPCAT2Q7L5N7 544 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 FRMD1Q8N878 549 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 MNS1Q8NEH6 495 aa15.25■□□□□ 0.03
VARS2-203ENST00000428017 SPATA4Q8NEY3 305 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms