RNA–Protein interactions for RNA: ENST00000427469.5

RCC1-207, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-207ENST00000427469 PPP6R3Q5H9R7 873 aaPredicted RBP13.22□□□□□ -0.29
RCC1-207ENST00000427469 PARGQ86W56 976 aa13.22□□□□□ -0.29
RCC1-207ENST00000427469 TMPRSS12Q86WS5 348 aa13.22□□□□□ -0.29
RCC1-207ENST00000427469 ZNF354CQ86Y25 554 aa13.22□□□□□ -0.29
RCC1-207ENST00000427469 TSEN2Q8NCE0 465 aaKnown RBP13.22□□□□□ -0.29
RCC1-207ENST00000427469 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
RCC1-207ENST00000427469 BTBD6Q96KE9 485 aa13.22□□□□□ -0.29
RCC1-207ENST00000427469 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
RCC1-207ENST00000427469 NCAPGQ9BPX3 1015 aa13.22□□□□□ -0.29
RCC1-207ENST00000427469 XPO4Q9C0E2 1151 aaKnown RBP13.22□□□□□ -0.29
RCC1-207ENST00000427469 TRAFD1O14545 582 aaPredicted RBP13.21□□□□□ -0.29
RCC1-207ENST00000427469 CSF2P04141 144 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 RARAP10276 462 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 CKMT2P17540 419 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 GM2AP17900 193 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 CR2P20023 1033 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 SUOXP51687 545 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 ARSEP51690 589 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 TPM4P67936 248 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 RAD51Q06609 339 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 IL10RBQ08334 325 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 RALGDSQ12967 914 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 ILKQ13418 452 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 PIGHQ14442 188 aaPredicted RBP13.21□□□□□ -0.29
RCC1-207ENST00000427469 GRM3Q14832 879 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 IRF4Q15306 451 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 ASTE1Q2TB18 679 aaPredicted RBP13.21□□□□□ -0.29
RCC1-207ENST00000427469 BRAT1Q6PJG6 821 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 CPNE8Q86YQ8 564 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 FAM181AQ8N9Y4 354 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 ZNF548Q8NEK5 533 aaPredicted RBP13.21□□□□□ -0.29
RCC1-207ENST00000427469 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 ZNF641Q96N77 438 aaPredicted RBP13.21□□□□□ -0.29
RCC1-207ENST00000427469 CSPG4P5Q96PW8 444 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 DNAJC7Q99615 494 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 NUP85Q9BW27 656 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 PCDH18Q9HCL0 1135 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 PCDH12Q9NPG4 1184 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 MBNL1Q9NR56 388 aaKnown RBP13.21□□□□□ -0.29
RCC1-207ENST00000427469 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■□□□ 12.2
RCC1-207ENST00000427469 NLGN3Q9NZ94 848 aa13.21□□□□□ -0.29
RCC1-207ENST00000427469 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.29
RCC1-207ENST00000427469 RIOK3O14730 519 aaKnown RBP13.2□□□□□ -0.3
RCC1-207ENST00000427469 FPGTO14772 594 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 LZTS3O60299 673 aaPredicted RBP13.2□□□□□ -0.3
RCC1-207ENST00000427469 MMP20O60882 483 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 CDK4P11802 303 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 PTMSP20962 102 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 IL4RP24394 825 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 CASP14P31944 242 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 NSUN2Q08J23 767 aaKnown RBP eCLIP13.2□□□□□ -0.3
RCC1-207ENST00000427469 RFTN1Q14699 578 aaPredicted RBP13.2□□□□□ -0.3
RCC1-207ENST00000427469 UGP2Q16851 508 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 BOLA3Q53S33 107 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 ZNF542PQ5EBM4 170 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 HES3Q5TGS1 186 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 TMCO4Q5TGY1 634 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 ALKBH5Q6P6C2 394 aaKnown RBP13.2□□□□□ -0.3
RCC1-207ENST00000427469 TTC7BQ86TV6 843 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 CAMK1DQ8IU85 385 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 PGBD5Q8N414 524 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 LZTR1Q8N653 840 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 PSKH2Q96QS6 385 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 ZWILCHQ9H900 591 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 IPO11Q9UI26 975 aaKnown RBP13.2□□□□□ -0.3
RCC1-207ENST00000427469 ANAPC7Q9UJX3 599 aa13.2□□□□□ -0.3
RCC1-207ENST00000427469 GOLGA6L19H0YKK7 550 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 H3BRJ5 948 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 K7ESM1 405 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 DFFAO00273 331 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 NEMP1O14524 444 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 SCAMP1O15126 338 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 FFAR2O15552 330 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 HTRA2O43464 458 aaPredicted RBP13.19□□□□□ -0.3
RCC1-207ENST00000427469 MAFKO60675 156 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 PALMO75781 387 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 NEBLO76041 1014 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 TM7SF2O76062 418 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 CKMT1AP12532 417 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 C6P13671 934 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 AMPD1P23109 780 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.37e-7■■■□□ 16.2
RCC1-207ENST00000427469 INSM1Q01101 510 aaPredicted RBP13.19□□□□□ -0.3
RCC1-207ENST00000427469 SLC10A7Q0GE19 358 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 ELP6Q0PNE2 266 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 SGCGQ13326 291 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 PDE1CQ14123 709 aaPredicted RBP13.19□□□□□ -0.3
RCC1-207ENST00000427469 WSCD2Q2TBF2 565 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 MACC1Q6ZN28 852 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 SRLQ86TD4 932 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 VPS36Q86VN1 386 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 CACTIN-AS1Q8N1I8 211 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 CXorf40AQ8TE69 158 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 CPLX3Q8WVH0 158 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 TBATAQ96M53 351 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 ZNF599Q96NL3 588 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 MGME1Q9BQP7 344 aa13.19□□□□□ -0.3
RCC1-207ENST00000427469 WRAP53Q9BUR4 548 aaKnown RBP13.19□□□□□ -0.3
RCC1-207ENST00000427469 TCEAL2Q9H3H9 227 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms