RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 LLGL1Q15334 1064 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 SLC45A4Q5BKX6 768 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 CFAP58Q5T655 872 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 PTAR1Q7Z6K3 402 aaPredicted RBP13.75□□□□□ -0.21
SNX3-204ENST00000426155 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
SNX3-204ENST00000426155 PLD5Q8N7P1 536 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 FEM1CQ96JP0 617 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 RNF157Q96PX1 679 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 KLF6Q99612 283 aaPredicted RBP13.75□□□□□ -0.21
SNX3-204ENST00000426155 C1QTNF2Q9BXJ5 285 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 PCDH12Q9NPG4 1184 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 PCOLCE2Q9UKZ9 415 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 COQ6Q9Y2Z9 468 aa13.75□□□□□ -0.21
SNX3-204ENST00000426155 EPN1Q9Y6I3 576 aaPredicted RBP13.75□□□□□ -0.21
SNX3-204ENST00000426155 A0A0U1RQJ8 604 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 TRAFD1O14545 582 aaPredicted RBP13.74□□□□□ -0.21
SNX3-204ENST00000426155 SDC3O75056 442 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 CR2P20023 1033 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 SPINK2P20155 84 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 XPAP23025 273 aaPredicted RBP13.74□□□□□ -0.21
SNX3-204ENST00000426155 EPHA8P29322 1005 aaPredicted RBP13.74□□□□□ -0.21
SNX3-204ENST00000426155 SERPINA4P29622 427 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 NUDT1P36639 197 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 CSNK1DP48730 415 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 DYNLT1P63172 113 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 BCL2L1Q07817 233 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 TRAF2Q12933 501 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 FOXC1Q12948 553 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 BNIP3Q12983 259 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 PTPRRQ15256 657 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 SPA17Q15506 151 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 UGP2Q16851 508 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 TPRG1LQ5T0D9 272 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 MFSD7Q6UXD7 560 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 NPNTQ6UXI9 565 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 MAP7D3Q8IWC1 876 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 RHOT1Q8IXI2 618 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 CXorf40AQ8TE69 158 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 SKA1Q96BD8 255 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 ECHDC3Q96DC8 303 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 KLHDC7BQ96G42 594 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 BMFQ96LC9 184 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 TUBGCP5Q96RT8 1024 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 MGME1Q9BQP7 344 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 NOD2Q9HC29 1040 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 NT5MQ9NPB1 228 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 DTLQ9NZJ0 730 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 PCDHGC4Q9Y5F7 938 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 ALG6Q9Y672 507 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 DUSP10Q9Y6W6 482 aa13.74□□□□□ -0.21
SNX3-204ENST00000426155 COL5A1P20908 1838 aaPredicted RBP13.74□□□□□ -0.21
SNX3-204ENST00000426155 AKAP13Q12802 2813 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 PTPRBP23467 1997 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 GOLGA8CPA6NN73 597 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 A8MX80 341 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 FLRT2O43155 660 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 PMLP29590 882 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 CDC25BP30305 580 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 IGFALSP35858 605 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 MMP12P39900 470 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 SLC1A1P43005 524 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 RENBPP51606 427 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
SNX3-204ENST00000426155 AP1S1P61966 158 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 NSUN2Q08J23 767 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNX3-204ENST00000426155 IHHQ14623 411 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 GRM3Q14832 879 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 MARC1Q5VT66 337 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 DBX2Q6ZNG2 339 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 Q6ZSR6 202 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 ABI3BPQ7Z7G0 1075 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 IQCHQ86VS3 1027 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 PAF1Q8N7H5 531 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 BAHD1Q8TBE0 780 aaPredicted RBP13.73□□□□□ -0.21
SNX3-204ENST00000426155 SAP25Q8TEE9 199 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 PDCD6IPQ8WUM4 868 aaKnown RBP13.73□□□□□ -0.21
SNX3-204ENST00000426155 ZNF641Q96N77 438 aaPredicted RBP13.73□□□□□ -0.21
SNX3-204ENST00000426155 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 LGMNQ99538 433 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 BAG1Q99933 345 aaPredicted RBP13.73□□□□□ -0.21
SNX3-204ENST00000426155 DESI2Q9BSY9 194 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 LACRTQ9GZZ8 138 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 MBNL1Q9NR56 388 aaKnown RBP13.73□□□□□ -0.21
SNX3-204ENST00000426155 ATP8A1Q9Y2Q0 1164 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 TTLL3Q9Y4R7 772 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 PCDHGB2Q9Y5G2 931 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 HEY1Q9Y5J3 304 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 CHD8Q9HCK8 2581 aa13.73□□□□□ -0.21
SNX3-204ENST00000426155 ARID1BQ8NFD5 2236 aaPredicted RBP13.72□□□□□ -0.21
SNX3-204ENST00000426155 A6NNZ2 444 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 KCNK1O00180 336 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
SNX3-204ENST00000426155 PCDHGA12O60330 932 aa13.72□□□□□ -0.21
SNX3-204ENST00000426155 TM7SF2O76062 418 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 749.2 ms