RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 BIRC7Q96CA5 298 aa25.62■■□□□ 1.69
TSPAN3-203ENST00000424443 FEM1CQ96JP0 617 aa25.62■■□□□ 1.69
TSPAN3-203ENST00000424443 MIR1-1HGQ9H1L0 117 aa25.62■■□□□ 1.69
TSPAN3-203ENST00000424443 C10orf88Q9H8K7 445 aa25.62■■□□□ 1.69
TSPAN3-203ENST00000424443 GLOD4Q9HC38 313 aa25.62■■□□□ 1.69
TSPAN3-203ENST00000424443 TRHDEQ9UKU6 1024 aa25.62■■□□□ 1.69
TSPAN3-203ENST00000424443 PCDHB9Q9Y5E1 797 aa25.62■■□□□ 1.69
TSPAN3-203ENST00000424443 TSPAN11A1L157 253 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 TSPAN6O43657 245 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 RNGTTO60942 597 aaKnown RBP25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 CD86P42081 329 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 ABL2P42684 1182 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 CCR5P51681 352 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 ASCL5Q7RTU5 278 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 PRPF39Q86UA1 669 aaKnown RBP25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 SYT12Q8IV01 421 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 ECHDC3Q96DC8 303 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 NSMCE3Q96MG7 304 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 SLC25A51Q9H1U9 297 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 KCND1Q9NSA2 647 aa25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 R3HDM2Q9Y2K5 976 aaKnown RBP25.61■■□□□ 1.69
TSPAN3-203ENST00000424443 USP34Q70CQ2 3546 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 HTRA2O43464 458 aaPredicted RBP25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 CPP00450 1065 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 GNSP15586 552 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 MAOBP27338 520 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 MPLP40238 635 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 NIPAL4Q0D2K0 466 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 TRAF2Q12933 501 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 NDUFAF2Q8N183 169 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 ZNF567Q8N184 647 aa25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 EIF2B4Q9UI10 523 aaKnown RBP25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 ATXN2Q99700 1313 aaKnown RBP25.6■■□□□ 1.69
TSPAN3-203ENST00000424443 GFRA3O60609 400 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 MAT2AP31153 395 aaKnown RBP25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 EPHB1P54762 984 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 FAM182AQ5T1J6 154 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 KIAA1161Q6NSJ0 714 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 TRIM69Q86WT6 500 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 CXorf40AQ8TE69 158 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 IMP4Q96G21 291 aaKnown RBP25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 OSBPL9Q96SU4 736 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 RBM15Q96T37 977 aaKnown RBP eCLIP25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 SUSD2Q9UGT4 822 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 DNPEPQ9ULA0 475 aa25.59■■□□□ 1.69
TSPAN3-203ENST00000424443 A0A1W2PQU0 124 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 CFAP69A5D8W1 941 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 IGHV4-34P06331 123 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 PPP2CBP62714 309 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 RPS21P63220 83 aaKnown RBP25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 PPP2CAP67775 309 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 FAM193AP78312 1265 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 ITPRIPL1Q6GPH6 555 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 RABEPKQ7Z6M1 372 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 HORMAD1Q86X24 394 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 ZSWIM9Q86XI8 627 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 SLC35B2Q8TB61 432 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 C1orf54Q8WWF1 131 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 ATG4AQ8WYN0 398 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 DNASE2BQ8WZ79 361 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 NAP1L3Q99457 506 aaPredicted RBP25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 PCDH12Q9NPG4 1184 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 RSPH14Q9UHP6 348 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 PILRBQ9UKJ0 227 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 PHTF1Q9UMS5 762 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 SNX12Q9UMY4 172 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 ITM2BQ9Y287 266 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 ZKSCAN5Q9Y2L8 839 aa25.58■■□□□ 1.69
TSPAN3-203ENST00000424443 PGLSO95336 258 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 NFKB1P19838 968 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 CD27P26842 260 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 HOXD12P35452 270 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 NUDT1P36639 197 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 PLA2G5P39877 138 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 TNNT3P45378 269 aaPredicted RBP25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 SKOR1P84550 965 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 SETMARQ53H47 684 aaPredicted RBP25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 ZSCAN30Q86W11 494 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 C17orf53Q8N3J3 647 aaPredicted RBP25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 NAPGQ99747 312 aaPredicted RBP25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 TDRD1Q9BXT4 1180 aaKnown RBP25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 ZNF148Q9UQR1 794 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 CHKBQ9Y259 395 aa25.58■■□□□ 1.68
TSPAN3-203ENST00000424443 A0A1W2PPC4 97 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 CTAGE9A4FU28 777 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 RIOK3O14730 519 aaKnown RBP25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 AREL1O15033 823 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 LIASO43766 372 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 CEP76Q8TAP6 659 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 TMEM121Q9BTD3 319 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 PCDH9Q9HC56 1237 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 VPS45Q9NRW7 570 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 TMEM74BQ9NUR3 256 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 GGT7Q9UJ14 662 aa25.57■■□□□ 1.68
TSPAN3-203ENST00000424443 LRP3O75074 770 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 PRKCGP05129 697 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 MMP2P08253 660 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 TCP1P17987 556 aaKnown RBP25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 ITIH2P19823 946 aa25.56■■□□□ 1.68
TSPAN3-203ENST00000424443 CD68P34810 354 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms