RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 POLD3Q15054 466 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 C17orf99Q6UX52 265 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MYLK4Q86YV6 388 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 LGI2Q8N0V4 545 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 NSUN5Q96P11 429 aaKnown RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 SLC9A7Q96T83 725 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 VCXQ9H320 206 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 CRISPLD1Q9H336 500 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 TCAF1Q9Y4C2 921 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 SBF1O95248 1867 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MAGEC1O60732 1142 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MT-ND1P03886 318 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 DNAJB2P25686 324 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 FMO4P31512 558 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 RPL34P49207 117 aaKnown RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 CDKN1CP49918 316 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 TAF12Q16514 161 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 RAB41Q5JT25 222 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 LINC00523Q86TU6 105 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 RTN4RL1Q86UN2 441 aaPredicted RBP13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MAB21L3Q8N8X9 362 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 WDR41Q9HAD4 459 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 TIMM22Q9Y584 194 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 PCDHGC4Q9Y5F7 938 aa13.45□□□□□ -0.26
MCF2L-213ENST00000421756 MTSS1O43312 755 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 GRID2O43424 1007 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 SCNN1AP37088 669 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 GEMP55040 296 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 CYTH1Q15438 398 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 VARS2Q5ST30 1063 aaKnown RBP13.44□□□□□ -0.26
MCF2L-213ENST00000421756 AMIGO2Q86SJ2 522 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 DHDDSQ86SQ9 333 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 TMEM173Q86WV6 379 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-213ENST00000421756 KYQ8NBH2 561 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 TSC22D3Q99576 134 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 GPR22Q99680 433 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 SEMA4BQ9NPR2 832 aaPredicted RBP13.44□□□□□ -0.26
MCF2L-213ENST00000421756 PLK2Q9NYY3 685 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 COPG1Q9Y678 874 aaKnown RBP13.44□□□□□ -0.26
MCF2L-213ENST00000421756 CRCPO75575 148 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 CHRM3P20309 590 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 SERPINH1P50454 418 aaKnown RBP13.44□□□□□ -0.26
MCF2L-213ENST00000421756 C1QTNF8P60827 252 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 FUT11Q495W5 492 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 RGMBQ6NW40 437 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 NUDT8Q8WV74 236 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 RGS18Q9NS28 235 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 RAP2CQ9Y3L5 183 aa13.44□□□□□ -0.26
MCF2L-213ENST00000421756 HARS2P49590 506 aaKnown RBP13.43□□□□□ -0.26
MCF2L-213ENST00000421756 CDKN2DP55273 166 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 CCL23P55773 120 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 SPOUT1Q5T280 376 aaKnown RBP13.43□□□□□ -0.26
MCF2L-213ENST00000421756 PM20D1Q6GTS8 502 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 CD300LGQ6UXG3 332 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 LSMEM2Q8N112 164 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 NUP93Q8N1F7 819 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 FBXW8Q8N3Y1 598 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 ERLEC1Q96DZ1 483 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 LRGUKQ96M69 825 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 EGFL7Q9UHF1 273 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 AURKCQ9UQB9 309 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 CEP290O15078 2479 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 UBXN8O00124 270 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 MATN2O00339 956 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 RAMP2O60895 175 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 AOC2O75106 756 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 PAMP19021 973 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 RAP1GDS1P52306 607 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 MS4A13Q5J8X5 152 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 MRPL46Q9H2W6 279 aaKnown RBP13.43□□□□□ -0.26
MCF2L-213ENST00000421756 BATF3Q9NR55 127 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 TBC1D13Q9NVG8 400 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 ZNF212Q9UDV6 495 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 DNAH14Q0VDD8 3507 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 IQCF5A8MTL0 148 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 MUSKO15146 869 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 ACADSP16219 412 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 DPP6P42658 865 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 MLLT6P55198 1093 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-213ENST00000421756 CAPRIN1Q14444 709 aaKnown RBP13.43□□□□□ -0.26
MCF2L-213ENST00000421756 RPS6KA2Q15349 733 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 CLLU1OSQ5K130 101 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 TSTD2Q5T7W7 516 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 ZYG11AQ6WRX3 759 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 BNC2Q6ZN30 1099 aaPredicted RBP13.43□□□□□ -0.26
MCF2L-213ENST00000421756 TAS1R1Q7RTX1 841 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 DENND1CQ8IV53 801 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 OR6Y1Q8NGX8 325 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 TRPC4APQ8TEL6 797 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 SCLYQ96I15 445 aa13.43□□□□□ -0.26
MCF2L-213ENST00000421756 NOL6Q9H6R4 1146 aaKnown RBP13.43□□□□□ -0.26
MCF2L-213ENST00000421756 CCNCP24863 283 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 RPL9P32969 192 aaKnown RBP13.42□□□□□ -0.26
MCF2L-213ENST00000421756 SCAPQ12770 1279 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 CEACAM7Q14002 265 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms