RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MYBL1P10243 752 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 CDK4P11802 303 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 MYF5P13349 255 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 PCK1P35558 622 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 CSNK1DP48730 415 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 INSM1Q01101 510 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-206ENST00000420121 RAD51Q06609 339 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 CYP4F3Q08477 520 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 TARDBPQ13148 414 aaKnown RBP eCLIP11.15□□□□□ -0.62
SSBP3-206ENST00000420121 SGCGQ13326 291 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 PDE1CQ14123 709 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-206ENST00000420121 DPYSL2Q16555 572 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 PPP6R3Q5H9R7 873 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-206ENST00000420121 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 VPS36Q86VN1 386 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 PARGQ86W56 976 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
SSBP3-206ENST00000420121 FAM181AQ8N9Y4 354 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 ZNF548Q8NEK5 533 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-206ENST00000420121 HCAR2Q8TDS4 363 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 ECHDC3Q96DC8 303 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 APOLD1Q96LR9 279 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 THAP2Q9H0W7 228 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 TCEAL2Q9H3H9 227 aaPredicted RBP11.15□□□□□ -0.62
SSBP3-206ENST00000420121 SUV39H2Q9H5I1 410 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 DNAJC28Q9NX36 388 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 NLGN3Q9NZ94 848 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 CAPN11Q9UMQ6 739 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 RAXQ9Y2V3 346 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 COQ6Q9Y2Z9 468 aa11.15□□□□□ -0.62
SSBP3-206ENST00000420121 CACNA1GO43497 2377 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 KIF26BQ2KJY2 2108 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 K7ESM1 405 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 TM7SF2O76062 418 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 PRKCGP05129 697 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 RARAP10276 462 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 CKMT1AP12532 417 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 DESP17661 470 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 GM2AP17900 193 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 AMPD1P23109 780 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 MMP12P39900 470 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 ZNF135P52742 658 aaPredicted RBP11.14□□□□□ -0.63
SSBP3-206ENST00000420121 UBASH3AP57075 661 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 HNRNPKP61978 463 aaKnown RBP eCLIP11.14□□□□□ -0.63
SSBP3-206ENST00000420121 ZBED6P86452 979 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 SEMG2Q02383 582 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 SLC25A11Q02978 314 aaKnown RBP11.14□□□□□ -0.63
SSBP3-206ENST00000420121 IL10RBQ08334 325 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 RALGDSQ12967 914 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 ACAP1Q15027 740 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 AGERQ15109 404 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 IRF4Q15306 451 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 UGP2Q16851 508 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 SMTNL2Q2TAL5 461 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 WSCD2Q2TBF2 565 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 TDRD12Q587J7 1177 aaKnown RBP11.14□□□□□ -0.63
SSBP3-206ENST00000420121 POLNQ7Z5Q5 900 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 SRLQ86TD4 932 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 CAMK1DQ8IU85 385 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 RBFAQ8N0V3 343 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 CACTIN-AS1Q8N1I8 211 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 NIPA2Q8N8Q9 360 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 TRIM11Q96F44 468 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 TUBGCP5Q96RT8 1024 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 WRAP53Q9BUR4 548 aaKnown RBP11.14□□□□□ -0.63
SSBP3-206ENST00000420121 PCDH12Q9NPG4 1184 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 DONSONQ9NYP3 566 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 CSNK1G3Q9Y6M4 447 aa11.14□□□□□ -0.63
SSBP3-206ENST00000420121 DFFAO00273 331 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 TRAFD1O14545 582 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-206ENST00000420121 AQP9O43315 295 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 GCATO75600 419 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 SERPING1P05155 500 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 CYP1A2P05177 515 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 C6P13671 934 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 JUPP14923 745 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 JUNDP17535 347 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 CR2P20023 1033 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 HNF1BP35680 557 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 SUOXP51687 545 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 YPEL5P62699 121 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 NSUN2Q08J23 767 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSBP3-206ENST00000420121 SLC10A7Q0GE19 358 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 ELP6Q0PNE2 266 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 GRM3Q14832 879 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 RTP5Q14D33 572 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 CDCP2Q5VXM1 449 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 KCTD16Q68DU8 428 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 BRAT1Q6PJG6 821 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 CPNE8Q86YQ8 564 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 PGBD5Q8N414 524 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 DCBLD1Q8N8Z6 715 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 FAM71BQ8TC56 605 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 CXorf40AQ8TE69 158 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 CPLX3Q8WVH0 158 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 FUBP1Q96AE4 644 aaKnown RBP11.13□□□□□ -0.63
SSBP3-206ENST00000420121 ZNF641Q96N77 438 aaPredicted RBP11.13□□□□□ -0.63
SSBP3-206ENST00000420121 CSPG4P5Q96PW8 444 aa11.13□□□□□ -0.63
SSBP3-206ENST00000420121 PSKH2Q96QS6 385 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms