RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 TCAF2A6NFQ2 919 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 CREB3O43889 395 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 RNGTTO60942 597 aaKnown RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 LRIG2O94898 1065 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 TNFSF15O95150 251 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 MOCS3O95396 460 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 GJC1P36383 396 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 CLDN2P57739 230 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 ZNF177Q13360 481 aaPredicted RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 MESDQ14696 234 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 SMTNL2Q2TAL5 461 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 C5orf22Q49AR2 442 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 GCNT7Q6ZNI0 430 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 EFL1Q7Z2Z2 1120 aaKnown RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 CCDC117Q8IWD4 279 aaPredicted RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 ARL14Q8N4G2 192 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 ACRBPQ8NEB7 543 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 NTAN1Q96AB6 310 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 GRAMD1AQ96CP6 724 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 BAG1Q99933 345 aaPredicted RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 DHX35Q9H5Z1 703 aaKnown RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 IMPACTQ9P2X3 320 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 PPM1HQ9ULR3 514 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 PCDHA13Q9Y5I0 950 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 EPN1Q9Y6I3 576 aaPredicted RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 SPENQ96T58 3664 aaKnown RBP18.24■□□□□ 0.51
VCP-202ENST00000417448 TRPM6Q9BX84 2022 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 A0A1W2PQU0 124 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 RCCD1A6NED2 376 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 MYO1FO00160 1098 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 NOBOXO60393 691 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 FECHP22830 423 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 EFHC2Q5JST6 749 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 PERM1Q5SV97 790 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 PIP5KL1Q5T9C9 394 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 MANEALQ5VSG8 457 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 RBM44Q6ZP01 1051 aaKnown RBP18.23■□□□□ 0.51
VCP-202ENST00000417448 TMTC1Q8IUR5 882 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 NETO2Q8NC67 525 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 ZNF548Q8NEK5 533 aaPredicted RBP18.23■□□□□ 0.51
VCP-202ENST00000417448 FNIP1Q8TF40 1166 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 OR8D1Q8WZ84 308 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 KCTD15Q96SI1 283 aaPredicted RBP18.23■□□□□ 0.51
VCP-202ENST00000417448 DUSP23Q9BVJ7 150 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 PREBQ9HCU5 417 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 WDR70Q9NW82 654 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 DNAJC28Q9NX36 388 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 IP6K2Q9UHH9 426 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 AP4E1Q9UPM8 1137 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 NEU3Q9UQ49 428 aa18.23■□□□□ 0.51
VCP-202ENST00000417448 REXO2Q9Y3B8 237 aaKnown RBP18.23■□□□□ 0.51
VCP-202ENST00000417448 IGLV3-10A0A075B6K4 115 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 A0A0U1RQJ8 604 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 CPED1A4D0V7 1026 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 NEMP2A6NFY4 417 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 PRPSAP2O60256 369 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 NDUFA10O95299 355 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 GP1BBP13224 206 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 CYLC1P35663 651 aaPredicted RBP18.22■□□□□ 0.51
VCP-202ENST00000417448 CDH4P55283 916 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 TLE1Q04724 770 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 TGIF1Q15583 401 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 ZNF284Q2VY69 593 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 ATP13A4Q4VNC1 1196 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 ERMARDQ5T6L9 678 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 ZCCHC8Q6NZY4 707 aaKnown RBP18.22■□□□□ 0.51
VCP-202ENST00000417448 CCDC170Q8IYT3 715 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 OR7D4Q8NG98 312 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 WDR36Q8NI36 951 aaKnown RBP18.22■□□□□ 0.51
VCP-202ENST00000417448 HSPH1Q92598 858 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 ALG14Q96F25 216 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 ARHGAP9Q9BRR9 750 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 DESI2Q9BSY9 194 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 ZYG11BQ9C0D3 744 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 GPR27Q9NS67 375 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.22■□□□□ 0.51
VCP-202ENST00000417448 ZNF212Q9UDV6 495 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 DNAI1Q9UI46 699 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 HYOU1Q9Y4L1 999 aa18.22■□□□□ 0.51
VCP-202ENST00000417448 A0A0D9SEW6 157 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 EIF3CLB5ME19 914 aaKnown RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 SNAP91O60641 907 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 CLDN11O75508 207 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 LCA5LO95447 670 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 ITGB2P05107 769 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 RHOCP08134 193 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 ITGA2BP08514 1039 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 DESP17661 470 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 MLLT3P42568 568 aaPredicted RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 TAS2R40P59535 323 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 UBAP2LQ14157 1087 aaKnown RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 PIGHQ14442 188 aaPredicted RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 PPP6R3Q5H9R7 873 aaPredicted RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 TTC39BQ5VTQ0 682 aaPredicted RBP18.21■□□□□ 0.51
VCP-202ENST00000417448 FAM46CQ5VWP2 391 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 XKR5Q6UX68 686 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 USP53Q70EK8 1073 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 ABI3BPQ7Z7G0 1075 aa18.21■□□□□ 0.51
VCP-202ENST00000417448 TBC1D31Q96DN5 1066 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms