RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	GOLGA6B	A6NDN3	693 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	UPK3BL1	B0FP48	263 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	UPK3BL2	E5RIL1	263 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725		H0Y858	1186 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	CCDC188	H7C350	402 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	PLK4	O00444	970 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	MAP3K13	O43283	966 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	HTRA2	O43464	458 aa	Predicted RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	CP	P00450	1065 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	MMP2	P08253	660 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	GOLGA6D	P0CG33	693 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	ADRB3	P13945	408 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	COIL	P38432	576 aa	Predicted RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	KCNJ1	P48048	391 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	PTPN5	P54829	565 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	GEM	P55040	296 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	SKOR1	P84550	965 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	CKAP4	Q07065	602 aa	Known RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	TRAF2	Q12933	501 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	AGBL4	Q5VU57	503 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	CCDC137	Q6PK04	289 aa	Known RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	C4orf22	Q6V702	233 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	CEP68	Q76N32	757 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	TTC7B	Q86TV6	843 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	NDUFAF2	Q8N183	169 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	PRSS33	Q8NF86	280 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	OR14C36	Q8NHC7	312 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	FAM131C	Q96AQ9	280 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	VOPP1	Q96AW1	172 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	TOE1	Q96GM8	510 aa	Known RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	RUNDC3B	Q96NL0	473 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	TDRD1	Q9BXT4	1180 aa	Known RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	VPS45	Q9NRW7	570 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	GOLGA6A	Q9NYA3	693 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	FAM153A	Q9UHL3	310 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	INVS	Q9Y283	1065 aa		13.27	□□□□□ -0.29
SF1-206	ENST00000413725	AAR2	Q9Y312	384 aa	Known RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.27	□□□□□ -0.29
SF1-206	ENST00000413725	LRRC72	A6NJI9	287 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725		F5H423	210 aa	Predicted RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	TRAFD1	O14545	582 aa	Predicted RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PLRG1	O43660	514 aa	Known RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	LILRB5	O75023	590 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PMPCB	O75439	489 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PGLS	O95336	258 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	SEMA4F	O95754	770 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	GAS8	O95995	478 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	MT-CYB	P00156	380 aa	Predicted RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PSMB4	P28070	264 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	EPHB1	P54762	984 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	ADPRH	P54922	357 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	RPL26	P61254	145 aa	Known RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	ELP6	Q0PNE2	266 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	TCF15	Q12870	199 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	MPP3	Q13368	585 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	TUBB2A	Q13885	445 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PCSK7	Q16549	785 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	UGP2	Q16851	508 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PARP6	Q2NL67	630 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	FAM182A	Q5T1J6	154 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PIP5KL1	Q5T9C9	394 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	ERAP2	Q6P179	960 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PRPF39	Q86UA1	669 aa	Known RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	FAM160A2	Q8N612	972 aa	Predicted RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	SPATA22	Q8NHS9	363 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	SPOCK2	Q92563	424 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	IFT43	Q96FT9	208 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	NSMCE3	Q96MG7	304 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	TUBB2B	Q9BVA1	445 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	ADGRE3	Q9BY15	652 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PCED1A	Q9H1Q7	454 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	KDM4C	Q9H3R0	1056 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PCDH9	Q9HC56	1237 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	WSB2	Q9NYS7	404 aa	Predicted RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PAK5	Q9P286	719 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	CDC23	Q9UJX2	597 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PHTF1	Q9UMS5	762 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	RPL26L1	Q9UNX3	145 aa	Known RBP	13.26	□□□□□ -0.29
SF1-206	ENST00000413725	SCN8A	Q9UQD0	1980 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	CHKB	Q9Y259	395 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	PCDHB9	Q9Y5E1	797 aa		13.26	□□□□□ -0.29
SF1-206	ENST00000413725	CACNA1E	Q15878	2313 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	FAM47DP	A6NHR8	397 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	PDE2A	O00408	941 aa	Predicted RBP	13.25	□□□□□ -0.29
SF1-206	ENST00000413725	NEMP1	O14524	444 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	AP1G1	O43747	822 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	TIMP2	P16035	220 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	ACSL1	P33121	698 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	FDFT1	P37268	417 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	RPL6	Q02878	288 aa	Known RBP	13.25	□□□□□ -0.29
SF1-206	ENST00000413725	SRSF5	Q13243	272 aa	Known RBP	13.25	□□□□□ -0.29
SF1-206	ENST00000413725	ELF2	Q15723	593 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	WHAMMP3	Q1A5X7	153 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	CCDC70	Q6NSX1	233 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	TTC27	Q6P3X3	843 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	LPCAT2	Q7L5N7	544 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	FRMD1	Q8N878	549 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	OR2T34	Q8NGX1	318 aa		13.25	□□□□□ -0.29
SF1-206	ENST00000413725	TADA1	Q96BN2	335 aa		13.25	□□□□□ -0.29

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