RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 GPR34Q9UPC5 381 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 SMTNL1A8MU46 457 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 PSMA7O14818 248 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 TM7SF2O76062 418 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 RASGRP1O95267 797 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 UGT2B4P06133 528 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 SULT1E1P49888 294 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 ZNF165P49910 485 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 BLKP51451 505 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 SLC6A3Q01959 620 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 GNA12Q03113 381 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 STIM1Q13586 685 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 ANO6Q4KMQ2 910 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 KCTD16Q68DU8 428 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 TTI2Q6NXR4 508 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 LRRC31Q6UY01 552 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 NYAP1Q6ZVC0 841 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 TMPRSS9Q7Z410 1059 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 SPRED1Q7Z699 444 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 PTRH1Q86Y79 214 aaKnown RBP9.67□□□□□ -0.86
RFFL-203ENST00000413582 HID1Q8IV36 788 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 GPR156Q8NFN8 814 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 OR6C4Q8NGE1 309 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 SCG3Q8WXD2 468 aaKnown RBP9.67□□□□□ -0.86
RFFL-203ENST00000413582 ARHGEF2Q92974 986 aaKnown RBP9.67□□□□□ -0.86
RFFL-203ENST00000413582 NT5C3BQ969T7 300 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 TSACCQ96A04 125 aaPredicted RBP9.67□□□□□ -0.86
RFFL-203ENST00000413582 PGAP3Q96FM1 320 aaPredicted RBP9.67□□□□□ -0.86
RFFL-203ENST00000413582 DHTKD1Q96HY7 919 aaPredicted RBP9.67□□□□□ -0.86
RFFL-203ENST00000413582 C1orf74Q96LT6 269 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 CMKLR1Q99788 373 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 C1QTNF7Q9BXJ2 289 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 SLC12A9Q9BXP2 914 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 RRN3Q9NYV6 651 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 APPL1Q9UKG1 709 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 STAP1Q9ULZ2 295 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 CTNND2Q9UQB3 1225 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 MAN2B2Q9Y2E5 1009 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 PCDHB11Q9Y5F2 797 aa9.67□□□□□ -0.86
RFFL-203ENST00000413582 UTP20O75691 2785 aaKnown RBP9.67□□□□□ -0.86
RFFL-203ENST00000413582 CXorf51AA0A1B0GTR3 108 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 KRIT1O00522 736 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 MMP20O60882 483 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 GSRP00390 522 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 CTSEP14091 401 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 ACVRL1P37023 503 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 CASRP41180 1078 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 PEX5P50542 639 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 MAPK10P53779 464 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 POLE2P56282 527 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 DEUP1Q05D60 604 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 KCNAB2Q13303 367 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 NFATC4Q14934 902 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 C16orf72Q14CZ0 275 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 IGFBP7Q16270 282 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 DPCR1Q3MIW9 517 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 CERCAMQ5T4B2 595 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 ACBD5Q5T8D3 534 aaPredicted RBP9.66□□□□□ -0.86
RFFL-203ENST00000413582 KLHL10Q6JEL2 608 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 GJB7Q6PEY0 223 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 BORAQ6PGQ7 559 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 ENOSF1Q7L5Y1 443 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 GAS2L3Q86XJ1 694 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 GKN2Q86XP6 184 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 SFTPA2Q8IWL1 248 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 DRC7Q8IY82 874 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 RYBPQ8N488 228 aaPredicted RBP9.66□□□□□ -0.86
RFFL-203ENST00000413582 Q8N9G6 341 aaPredicted RBP9.66□□□□□ -0.86
RFFL-203ENST00000413582 OR2AP1Q8NGE2 309 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 ENOX1Q8TC92 643 aaKnown RBP9.66□□□□□ -0.86
RFFL-203ENST00000413582 CXorf40AQ8TE69 158 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 NELFBQ8WX92 580 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 PDXPQ96GD0 296 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 KLHL32Q96NJ5 620 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.86
RFFL-203ENST00000413582 TBCBQ99426 244 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 WRAP53Q9BUR4 548 aaKnown RBP9.66□□□□□ -0.86
RFFL-203ENST00000413582 OSBPL1AQ9BXW6 950 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 ZYG11BQ9C0D3 744 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 B3GNT4Q9C0J1 378 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.66□□□□□ -0.86
RFFL-203ENST00000413582 TUBD1Q9UJT1 453 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 PAXBP1Q9Y5B6 917 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 RNF215Q9Y6U7 377 aa9.66□□□□□ -0.86
RFFL-203ENST00000413582 TEP1Q99973 2627 aaKnown RBP9.66□□□□□ -0.86
RFFL-203ENST00000413582 SPENQ96T58 3664 aaKnown RBP9.66□□□□□ -0.86
RFFL-203ENST00000413582 TMEM110-MUSTN1A8MSY1 372 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 STMND1H3BQB6 276 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 SRGAP2O75044 1071 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 PNLIPP16233 465 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 GLB1P16278 677 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 ITIH2P19823 946 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 ARSDP51689 593 aa9.65□□□□□ -0.86
RFFL-203ENST00000413582 MARSP56192 900 aaKnown RBP9.65□□□□□ -0.86
RFFL-203ENST00000413582 SRP54P61011 504 aaKnown RBP9.65□□□□□ -0.86
RFFL-203ENST00000413582 SNRPD1P62314 119 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms