RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SNX29P2Q8IUI4 249 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 TMIEQ8NEW7 156 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 OR2T3Q8NH03 318 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZNF461Q8TAF7 563 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ADAM32Q8TC27 787 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SPPL3Q8TCT6 385 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 GRIN3AQ8TCU5 1115 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 KLHL6Q8WZ60 621 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SNAPC3Q92966 411 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 QRFPRQ96P65 431 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 NEU1Q99519 415 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZNF416Q9BWM5 594 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CHID1Q9BWS9 393 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 NKIRAS1Q9NYS0 192 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 PKD2L1Q9P0L9 805 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 GMPR2Q9P2T1 348 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 A0A0G2JLW4 131 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 PI4KAP2A4QPH2 592 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SNAP23O00161 211 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 NOL4O94818 638 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 KRT1P04264 644 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ERBB2P04626 1255 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SLC5A1P13866 664 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 PTAFRP25105 342 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 PGM1P36871 562 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SPAM1P38567 509 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 GRIA3P42263 894 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 RAD52P43351 418 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 DIO1P49895 249 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CAPZA1P52907 286 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 FLI1Q01543 452 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 PSMD5Q16401 504 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 IL31Q6EBC2 164 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 DCUN1D2Q6PH85 259 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 OTOAQ7RTW8 1153 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TLK2Q86UE8 772 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 THNSL1Q8IYQ7 743 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 DSELQ8IZU8 1212 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CPXCR1Q8N123 301 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ZNF276Q8N554 614 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 PI4KAP1Q8N8J0 262 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ELP4Q96EB1 424 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CNBD2Q96M20 576 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 KLHL15Q96M94 604 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CAMK1GQ96NX5 476 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 IL12RB2Q99665 862 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ALG13Q9NP73 1137 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 AKIP1Q9NQ31 210 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SEMA3GQ9NS98 782 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 HOMER2Q9NSB8 354 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 IPO11Q9UI26 975 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 GGA1Q9UJY5 639 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SLC27A5Q9Y2P5 690 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.27□□□□□ -1.57
HERC4-205ENST00000412272 AP4B1Q9Y6B7 739 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 PQLC2LA1A4F0 135 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TRIM49BA6NDI0 452 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 THAP12O43422 761 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CAMTA2O94983 1202 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 FGGP02679 453 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CD63P08962 238 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 BRAFP15056 766 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CAPN3P20807 821 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TIE1P35590 1138 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 OPRL1P41146 370 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SERPINH1P50454 418 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 PPATQ06203 517 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 PDK1Q15118 436 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TEAD4Q15561 434 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TSC22D1Q15714 1073 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ABCB5Q2M3G0 1257 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ATG16L1Q676U5 607 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 RINT1Q6NUQ1 792 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ZCCHC12Q6PEW1 402 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 STXBP4Q6ZWJ1 553 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CENPUQ71F23 418 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 NLRP8Q86W28 1048 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 RCOR2Q8IZ40 523 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 DCP1BQ8IZD4 617 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 MPP5Q8N3R9 675 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TAB3Q8N5C8 712 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 KDM1BQ8NB78 822 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 Q8NFD4 153 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 GPR156Q8NFN8 814 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 METTL6Q8TCB7 284 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 FBXO25Q8TCJ0 367 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 DCUN1D1Q96GG9 259 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 SH3YL1Q96HL8 342 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 APOPT1Q96IL0 206 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ZFYVE19Q96K21 471 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 FAM161BQ96MY7 647 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TINF2Q9BSI4 451 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 PAPOLGQ9BWT3 736 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 RNF26Q9BY78 433 aaPredicted RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 NPHS2Q9NP85 383 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 ANKEF1Q9NU02 776 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 CD274Q9NZQ7 290 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 TRMT6Q9UJA5 497 aaKnown RBP5.27□□□□□ -1.57
HERC4-205ENST00000412272 ZNF221Q9UK13 617 aa5.27□□□□□ -1.57
HERC4-205ENST00000412272 MAGED2Q9UNF1 606 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms