RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 VPS28Q9UK41 221 aa14.35□□□□□ -0.11
ATRIP-204ENST00000412052 KCTD3Q9Y597 815 aa14.35□□□□□ -0.11
ATRIP-204ENST00000412052 RAD54BQ9Y620 910 aa14.35□□□□□ -0.11
ATRIP-204ENST00000412052 DICER1Q9UPY3 1922 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 CACNG3O60359 315 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 ADRA1AP35348 466 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 CDH13P55290 713 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 FASTKQ14296 549 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 PTPRCAPQ14761 206 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 FBXO48Q5FWF7 155 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 TECRLQ5HYJ1 363 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 INTS6LQ5JSJ4 861 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 IQSEC1Q6DN90 963 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 TFAP2DQ7Z6R9 452 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 LINC00523Q86TU6 105 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 C2CD4AQ8NCU7 369 aaPredicted RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 CEP70Q8NHQ1 597 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 LPGAT1Q92604 370 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 CASP10Q92851 521 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 TMIGD2Q96BF3 282 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SMARCD1Q96GM5 515 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 C3orf30Q96M34 536 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 CIB1Q99828 191 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SENP6Q9GZR1 1112 aaPredicted RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 RBM38Q9H0Z9 239 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 ARHGEF38Q9NXL2 777 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 RAB26Q9ULW5 256 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SNX13Q9Y5W8 968 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SLC4A7Q9Y6M7 1214 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 HTTP42858 3142 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SMIM31A0A1B0GVY4 71 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 TRIM38O00635 465 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 CKMT2P17540 419 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 UGT1A6P19224 532 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SOX11P35716 441 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SLC12A2P55011 1212 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 DYNC1I2Q13409 638 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 HERC3Q15034 1050 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 SDHAF4Q5VUM1 108 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 NEPROQ6NW34 567 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 ZFP1Q6P2D0 407 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 ADCY4Q8NFM4 1077 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 OR10T2Q8NGX3 314 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 FCRL2Q96LA5 508 aaPredicted RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 FCRL5Q96RD9 977 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 MRPL57Q9BQC6 102 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 MRPL1Q9BYD6 325 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 ALG9Q9H6U8 611 aa14.34□□□□□ -0.11
ATRIP-204ENST00000412052 LIN28AQ9H9Z2 209 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 AAR2Q9Y312 384 aaKnown RBP14.34□□□□□ -0.11
ATRIP-204ENST00000412052 ANKRD12Q6UB98 2062 aa14.33□□□□□ -0.11
ATRIP-204ENST00000412052 CROCCQ5TZA2 2017 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 hCG_2014768A0A024R1R8 64 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 H3BSA7 217 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 POMCP01189 267 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 ATP5F1P24539 256 aaPredicted RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 HADHAP40939 763 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 ARSDP51689 593 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 LRP8Q14114 963 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 SETD3Q86TU7 594 aaPredicted RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 DGCR14Q96DF8 476 aaKnown RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 RPL10LQ96L21 214 aaKnown RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 IL12RB2Q99665 862 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 ARL5CA6NH57 179 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 ZNF839A8K0R7 811 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 PSMD12O00232 456 aaPredicted RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 UBDO15205 165 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 STRNO43815 780 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 TIPRLO75663 272 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 SLC4A1P02730 911 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 ITGB1P05556 798 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 OR4Q2P0C623 313 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 FAM58BPP0C7Q3 252 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 CRYBB1P53674 252 aaPredicted RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 CDKN2DP55273 166 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 WNT3AP56704 352 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 UGP2Q16851 508 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 C6orf10Q5SRN2 563 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 LDLRAD1Q5T700 205 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 GPR158Q5T848 1215 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 HMBOX1Q6NT76 420 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 PIWIL4Q7Z3Z4 852 aaKnown RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 B4GALNT2Q8NHY0 566 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 TSGA13Q96PP4 275 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 Q9H521 79 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 NSMCE4AQ9NXX6 385 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 MARCH4Q9P2E8 410 aaPredicted RBP14.33□□□□□ -0.12
ATRIP-204ENST00000412052 AP4S1Q9Y587 144 aa14.33□□□□□ -0.12
ATRIP-204ENST00000412052 KLHL33A6NCF5 533 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 SLCO1B7G3V0H7 640 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 NPHS1O60500 1241 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 F9P00740 461 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 THP07101 528 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 CCNCP24863 283 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 TRIM25Q14258 630 aaKnown RBP14.32□□□□□ -0.12
ATRIP-204ENST00000412052 ARHGAP22Q7Z5H3 698 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 HERC6Q8IVU3 1022 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 ASB9Q96DX5 294 aa14.32□□□□□ -0.12
ATRIP-204ENST00000412052 HIC2Q96JB3 615 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms